RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 ERG28Q9UKR5 140 aa4.69□□□□□ -1.66
LINC00556-201ENST00000569603 TRAPPC2LQ9UL33 140 aa4.69□□□□□ -1.66
LINC00556-201ENST00000569603 TRAV30A0A087WSZ9 112 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 SAA2-SAA4A0A096LPE2 208 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 TMEM218A2RU14 115 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 FOXI3A8MTJ6 420 aaPredicted RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 ATP6V0E1O15342 81 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 TOMM40O96008 361 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 SAA2P0DJI9 122 aaPredicted RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 SLC2A2P11168 524 aaPredicted RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 FOLR2P14207 255 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 BLVRBP30043 206 aaPredicted RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 PPP1CCP36873 323 aaKnown RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 SCGB2B2Q4G0G5 96 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 C9orf66Q5T8R8 295 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 GLIPR1L1Q6UWM5 242 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 ZNF66Q6ZN08 573 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 Q6ZWC4 215 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 LRRTM1Q86UE6 522 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 ZFP41Q8N8Y5 198 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 BORCS7Q96B45 105 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 PARP12Q9H0J9 701 aaKnown RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 SH3BGRL3Q9H299 93 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 BANF2Q9H503 90 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 Q9H521 79 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 TAF9BQ9HBM6 251 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 ZNF256Q9Y2P7 627 aaPredicted RBP4.68□□□□□ -1.66
LINC00556-201ENST00000569603 OR51B2Q9Y5P1 312 aa4.68□□□□□ -1.66
LINC00556-201ENST00000569603 A0A0A6YYD4 124 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 TRBV6-6A0A0A6YYG2 114 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 A0A1B0GX51 115 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 MCRIP1C9JLW8 97 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 H3BMQ9 156 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 C3orf84H3BNL1 204 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 DNASE2O00115 360 aaPredicted RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 MRPS12O15235 138 aaKnown RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 BUB3O43684 328 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 YPEL1O60688 119 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 PDCD6O75340 191 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 PFN1P07737 140 aaKnown RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 CT45A6P0DMU7 189 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 CT45A5P0DMU8 189 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 CT45A7P0DMV0 189 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 MYOD1P15172 320 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 AZU1P20160 251 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 RAB5AP20339 215 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 IL3RAP26951 378 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 GALR1P47211 349 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 INSL3P51460 131 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 EMP1P54849 157 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 INSL4Q14641 139 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 RHEBQ15382 184 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 MMDQ15546 238 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 ZNF260Q3ZCT1 412 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 C1orf100Q5SVJ3 147 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 COL5A1-AS1Q5SY13 56 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 Q75L30 129 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 SNX29P2Q8IUI4 249 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 SBSPONQ8IVN8 264 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 H1FOOQ8IZA3 346 aaPredicted RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 OR5A1Q8NGJ0 315 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 OR10G7Q8NGN6 311 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 OR1N2Q8NGR9 330 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 OR10R2Q8NGX6 335 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 MBD3L1Q8WWY6 194 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 RBPMSQ93062 196 aaKnown RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 HIST1H2BAQ96A08 127 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 EEF1AKMT3Q96AZ1 226 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 YPEL2Q96QA6 119 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 TM2D1Q9BX74 207 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 SNHG12Q9BXW3 62 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 SELENOIQ9C0D9 397 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 LYRM2Q9NU23 88 aaPredicted RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 MRPL16Q9NX20 251 aaKnown RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 PRNDQ9UKY0 176 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 RAB22AQ9UL26 194 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 VSIG4Q9Y279 399 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 LSM2Q9Y333 95 aaKnown RBP4.67□□□□□ -1.66
LINC00556-201ENST00000569603 DNAH6Q9C0G6 4158 aa4.67□□□□□ -1.66
LINC00556-201ENST00000569603 HERC2O95714 4834 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 HECTD4Q9Y4D8 3996 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 TRAV41A0A0B4J266 112 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 A0A0G2JLM5 398 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 FAM240AA0A1B0GVK7 77 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 IRGMA1A4Y4 181 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 C15orf62A8K5M9 175 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 TMEM14DPA8MWL7 114 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 C1orf196B1AJZ1 125 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 H0YJW9 148 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 J3KT08 172 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 FCN1O00602 326 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 CCL25O15444 150 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 MAS1P04201 325 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 TRAPPC2P0DI81 140 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 TRAPPC2BP0DI82 140 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 VDAC1P21796 283 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 NPY1RP25929 384 aa4.66□□□□□ -1.66
LINC00556-201ENST00000569603 RPS27AP62979 156 aaKnown RBP4.66□□□□□ -1.66
LINC00556-201ENST00000569603 RPL18AQ02543 176 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms