RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 COL25A1Q9BXS0 654 aaPredicted RBP6.99□□□□□ -1.29
LINC00558-201ENST00000569422 TP53TG3Q9ULZ0 132 aa6.99□□□□□ -1.29
LINC00558-201ENST00000569422 A6NNC1 897 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 PEX7O00628 323 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 NDUFS7O75251 213 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 IGLV1-47P01700 117 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 PMCHP20382 165 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 CA7P43166 264 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
LINC00558-201ENST00000569422 FXYD5Q96DB9 178 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
LINC00558-201ENST00000569422 MAP1AP78559 2803 aaPredicted RBP6.98□□□□□ -1.29
LINC00558-201ENST00000569422 TRAV8-1A0A0A6YYK1 113 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 C20orf202A1L168 122 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 HYPMO75409 117 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 LY6DQ14210 128 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 SAMD13Q5VXD3 122 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 TOMM20LQ6UXN7 152 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 WNT10AQ9GZT5 417 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 NCBP2LA6PVI3 153 aaKnown RBP6.98□□□□□ -1.29
LINC00558-201ENST00000569422 GCGP01275 180 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 IGHV3-23P01764 117 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 PSG1P11464 419 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 SRIP30626 198 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 GPR6P46095 362 aaPredicted RBP6.98□□□□□ -1.29
LINC00558-201ENST00000569422 TEX45Q8NA69 505 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 OR5R1Q8NH85 324 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 ZFP30Q9Y2G7 519 aa6.98□□□□□ -1.29
LINC00558-201ENST00000569422 POLR3KQ9Y2Y1 108 aaPredicted RBP6.98□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF253O75346 499 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 NTF3P20783 257 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 KRTDAPP60985 99 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 ADORA2A-AS1P86434 159 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 SRSF1Q07955 248 aaKnown RBP eCLIP6.97□□□□□ -1.29
LINC00558-201ENST00000569422 MRPL23Q16540 153 aaKnown RBP6.97□□□□□ -1.29
LINC00558-201ENST00000569422 IQCJQ1A5X6 159 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 TDRG1Q3Y452 100 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 FBLN7Q53RD9 439 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 IGF2BP2-AS1Q96M15 143 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 TBX15Q96SF7 602 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
LINC00558-201ENST00000569422 IGHV3OR16-8A0A075B7F1 116 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 ZNF137PP52743 207 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 CX3CL1P78423 397 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 FAM71F2Q6NXP2 309 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 TCF24Q7RTU0 167 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 FAM19A2Q8N3H0 131 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 OR11H1Q8NG94 326 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 OR11H2Q8NH07 326 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 VN1R17PQ8TDU5 208 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 OSTCQ9NRP0 149 aa6.97□□□□□ -1.29
LINC00558-201ENST00000569422 IGHV3-35A0A0C4DH35 117 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 TEX22C9J3V5 150 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 CCL25O15444 150 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 HTR1DP28221 377 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 LINC00310P59036 64 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 Q71RC1 249 aaPredicted RBP6.96□□□□□ -1.29
LINC00558-201ENST00000569422 RCHY1Q96PM5 261 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 RASL11BQ9BPW5 248 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 EPDR1Q9UM22 224 aa6.96□□□□□ -1.29
LINC00558-201ENST00000569422 F11RQ9Y624 299 aaKnown RBP6.96□□□□□ -1.29
LINC00558-201ENST00000569422 LOC105371242A0A075B767 164 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 TPPP2P59282 170 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 RPL32P62910 135 aaKnown RBP6.96□□□□□ -1.3
LINC00558-201ENST00000569422 Q6ZWC4 215 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 SSX8Q7RTT4 187 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 THAP8Q8NA92 274 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 TIMD4Q96H15 378 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 CBLN4Q9NTU7 201 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 CDC42EP3Q9UKI2 254 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 PAM16Q9Y3D7 125 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 LY96Q9Y6Y9 160 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 HRNRQ86YZ3 2850 aaPredicted RBP6.96□□□□□ -1.3
LINC00558-201ENST00000569422 AMTP48728 403 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 TMEM136Q6ZRR5 245 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 C8orf31Q8N9H6 132 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 PTH2Q96A98 100 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 C17orf77Q96MU5 243 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 Q9H3A6 140 aa6.96□□□□□ -1.3
LINC00558-201ENST00000569422 M0QZ24 198 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 APCSP02743 223 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 KLRB1Q12918 225 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 CCDC144NLQ6NUI1 221 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 SIGLECL1Q8N7X8 197 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 RAX2Q96IS3 184 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 MCRIP2Q9BUT9 160 aaKnown RBP6.95□□□□□ -1.3
LINC00558-201ENST00000569422 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 INS-IGF2F8WCM5 200 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 FSTL3O95633 263 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 OCIAD2Q56VL3 154 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 LINC00322Q6ZN03 302 aaPredicted RBP6.95□□□□□ -1.3
LINC00558-201ENST00000569422 PRNTQ86SH4 94 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 NUP35Q8NFH5 326 aa6.95□□□□□ -1.3
LINC00558-201ENST00000569422 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms