RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 FGF7P21781 194 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 SNRPD3P62318 126 aaKnown RBP6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 IL15RAQ13261 267 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 CLINT1Q14677 625 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 GDF5OSQ5U4N7 250 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 PATE2Q6UY27 113 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 STX12Q86Y82 276 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 OR4B1Q8NGF8 309 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 THAP6Q8TBB0 222 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 SLC25A39Q9BZJ4 359 aaPredicted RBP6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 SMIM3Q9BZL3 60 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 C11orf1Q9H5F2 150 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 LYRM2Q9NU23 88 aaPredicted RBP6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 UQCC1Q9NVA1 299 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 TENM3Q9P273 2699 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 TRAV5A0A0B4J249 113 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 COX7A2P2O60397 106 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 ZNF705DP0CH99 300 aaPredicted RBP6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 ZNF705BP0CI00 300 aaPredicted RBP6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 CXCL3P19876 107 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 HLA-DMBP28068 263 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 ID1P41134 155 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 GALR1P47211 349 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 CAMLGP49069 296 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 SULT1A1P50225 295 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 EWSR1Q01844 656 aaKnown RBP eCLIP6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 LINC00305Q7Z4B0 112 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 OR5C1Q8NGR4 320 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 OR11H2Q8NH07 326 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 PPP1R1CQ8WVI7 109 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 RARRES2Q99969 163 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 NMES1Q9C002 83 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 ARV1Q9H2C2 271 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 SLC45A2Q9UMX9 530 aa6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 KMT2CQ8NEZ4 4911 aaKnown RBP6.62□□□□□ -1.35
GTF3C1-210ENST00000569394 IGHV3OR16-12A0A075B7B8 117 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 TRAV2A0A0B4J234 112 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 E5RGE8 158 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 H3BRN7 92 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 CFDP00746 253 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 C4BPBP20851 252 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 S100A11P31949 105 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 NUP62P37198 522 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 FCN2Q15485 313 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 CASC10Q5T4H9 136 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 MORN5Q5VZ52 161 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 TRPT1Q86TN4 253 aaKnown RBP6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 ZNF546Q86UE3 836 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 LRRC20Q8TCA0 184 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 RNF183Q96D59 192 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 C17orf77Q96MU5 243 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 SHANK2-AS3Q9BTD1 123 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 FBXL17Q9UF56 701 aa6.61□□□□□ -1.35
GTF3C1-210ENST00000569394 KIR2DL5BA0A0G2JN68 375 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 KIR2DL5BA0A0G2JPC4 375 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 UBE2CO00762 179 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 EIF3GO75821 320 aaKnown RBP eCLIP6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 MPC2O95563 127 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 SELENOTP62341 195 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 HBG1P69891 147 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 HBG2P69892 147 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 RAB31Q13636 194 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 GCSAMLQ5JQS6 135 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 C10orf113Q5VZT2 155 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 Q6ZRG5 221 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 Q6ZWC4 215 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 KIR2DL5AQ8N109 375 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 TMEM37Q8WXS4 190 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 RNF126Q9BV68 326 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 GGACTQ9BVM4 153 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 SLC25A31Q9H0C2 315 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 MED28Q9H204 178 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 MBD2Q9UBB5 411 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 PXMP4Q9Y6I8 212 aa6.6□□□□□ -1.35
GTF3C1-210ENST00000569394 TRAV8-2A0A0B4J237 113 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 CXorf65A6NEN9 183 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 SOCS3O14543 225 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 PTTG1O95997 202 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 PSMB3P49720 205 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 B2MP61769 119 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 CYCSP99999 105 aaKnown RBP6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 OPCMLQ14982 345 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 FAM78BQ5VT40 261 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 EBLN2Q6P2I7 272 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 OR11H7Q8NGC8 314 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 SSBP4Q9BWG4 385 aaPredicted RBP6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 SLC35B3Q9H1N7 401 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 SLC39A9Q9NUM3 307 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 WDR83OSQ9Y284 106 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 RFNGQ9Y644 331 aa6.59□□□□□ -1.35
GTF3C1-210ENST00000569394 FNDC10F2Z333 226 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms