RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 GAGE1Q13065 139 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 BSXQ3C1V8 233 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 ACTL10Q5JWF8 245 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 ZNF343Q6P1L6 599 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 SLC25A48Q6ZT89 311 aaKnown RBP8.24□□□□□ -1.09
CDH3-208ENST00000569036 STPG3Q8N7X2 389 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 NPBQ8NG41 125 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 OR4X1Q8NH49 305 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 GNG13Q9P2W3 67 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 SELENOKQ9Y6D0 94 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 IGKV1-12A0A0C4DH73 117 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 A0A0G2JLM5 398 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 KIR2DL5BA0A0G2JN68 375 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 KIR2DL5BA0A0G2JPC4 375 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 CTXND1A0A1B0GTU2 59 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 MAP1LC3B2A6NCE7 125 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 IGKV1D-12P01611 117 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 FCGR2BP31994 310 aaPredicted RBP8.23□□□□□ -1.09
CDH3-208ENST00000569036 PAX9P55771 341 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
CDH3-208ENST00000569036 C1orf134Q5TEV5 83 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 PVRIGQ6DKI7 326 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 ODF3L1Q8IXM7 274 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 TMEM61Q8N0U2 210 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 KIR2DL5AQ8N109 375 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 ZBTB34Q8NCN2 500 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 OR51G1Q8NGK1 321 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 KIR2DL5BQ8NHK3 375 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 UBALD1Q8TB05 177 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 TMEM68Q96MH6 324 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 SMIM7Q9BQ49 75 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 MAP1LC3BQ9GZQ8 125 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 TECRQ9NZ01 308 aaKnown RBP8.23□□□□□ -1.09
CDH3-208ENST00000569036 URGCP-MRPS24S4R325 110 aa8.23□□□□□ -1.09
CDH3-208ENST00000569036 IGHV3-43A0A0B4J1X8 118 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 J3QL48 77 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 M0R143 59 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 LGALS9O00182 355 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 FCN1O00602 326 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 TCAPO15273 167 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 SYNGR2O43760 224 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 SERPINE2P07093 398 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 IGHV3-43DP0DP04 118 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 ERVFC1-1P60608 527 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 ZNF880Q6PDB4 577 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 GAPTQ8N292 157 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
CDH3-208ENST00000569036 FBXL15Q9H469 300 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 RPRMQ9NS64 109 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 AGRNO00468 2067 aa8.22□□□□□ -1.09
CDH3-208ENST00000569036 XKRY2A2RUG3 117 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 C2orf70A6NJV1 201 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 H3BUA1 57 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 PDE6DO43924 150 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 CST7O76096 145 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 OR7C1O76099 320 aaPredicted RBP8.21□□□□□ -1.1
CDH3-208ENST00000569036 TMEM50AO95807 157 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 OR10J1P30954 320 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 GALR1P47211 349 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 PIGYQ3MUY2 71 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 C1orf194Q5T5A4 169 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 ZNF818PQ6ZRF7 136 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 Q6ZRM9 215 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 ZNF439Q8NDP4 499 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 CCDC140Q96MF4 163 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 CIB3Q96Q77 187 aaPredicted RBP8.21□□□□□ -1.1
CDH3-208ENST00000569036 ABHD14AQ9BUJ0 271 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 OR2W1Q9Y3N9 320 aa8.21□□□□□ -1.1
CDH3-208ENST00000569036 ZFP92A6NM28 416 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 CEBPZOSA8MTT3 80 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 F6UZH7 168 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 BMPR1BO00238 502 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 DEFB4AO15263 64 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 PGLYRP1O75594 196 aaPredicted RBP8.2□□□□□ -1.1
CDH3-208ENST00000569036 LINC00614P0C842 121 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 ESDP10768 282 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 CEBPGP53567 150 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 PAFAH1B2P68402 229 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 RPL19P84098 196 aaKnown RBP8.2□□□□□ -1.1
CDH3-208ENST00000569036 USF2Q15853 346 aaPredicted RBP8.2□□□□□ -1.1
CDH3-208ENST00000569036 COX19Q49B96 90 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 Q5VSD8 79 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 TMEM147Q9BVK8 224 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 SLC39A9Q9NUM3 307 aa8.2□□□□□ -1.1
CDH3-208ENST00000569036 TRAV24A0A0B4J272 114 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 A0A1B0GV50 99 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 C17orf112F2Z3M2 114 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 C15orf65H3BRN8 121 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 RRHO14718 337 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 RD3LP0DJH9 198 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 CNN1P51911 297 aaKnown RBP8.19□□□□□ -1.1
CDH3-208ENST00000569036 ZNF134P52741 427 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
CDH3-208ENST00000569036 PAX5Q02548 391 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 PLGLAQ15195 96 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 ADIRFQ15847 76 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 CT45A1Q5HYN5 189 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms