RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	PRAF2	O60831	178 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	DEDD	O75618	318 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	DUSP14	O95147	198 aa	Known RBP	7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	LY6G6C	O95867	125 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	S100A11	P31949	105 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	PLP1	P60201	277 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	CYCS	P99999	105 aa	Known RBP	7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	SLC38A11	Q08AI6	406 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	GOLT1B	Q9Y3E0	138 aa		7.56	□□□□□ -1.2
UBR1-207	ENST00000568782	IGHV3OR16-12	A0A075B7B8	117 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	IGHV4-28	A0A0C4DH34	117 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	SMIM9	A6NGZ8	99 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782		A6NHS1	94 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	ZNF705E	A8MWA4	302 aa	Predicted RBP	7.55	□□□□□ -1.2
UBR1-207	ENST00000568782		H3BRN7	92 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	AGPAT2	O15120	278 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	C4BPB	P20851	252 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	TCTA	P57738	103 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	NANOS2	P60321	138 aa	Known RBP	7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	PSG9	Q00887	426 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	ATP6V1F	Q16864	119 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	ZNF738	Q8NE65	137 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	C2CD4C	Q8TF44	421 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	CLUHP3	Q96NS8	147 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	SHANK2-AS3	Q9BTD1	123 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	TMEM208	Q9BTX3	173 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	SCRT1	Q9BWW7	348 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	ARV1	Q9H2C2	271 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	HRH4	Q9H3N8	390 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	UQCC1	Q9NVA1	299 aa		7.55	□□□□□ -1.2
UBR1-207	ENST00000568782	TMEM189	A5PLL7	270 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	INMT-MINDY4	F8WBC2	141 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	CCNK	O75909	580 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	CST7	O76096	145 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	AMBP	P02760	352 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	CAMLG	P49069	296 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	SULT1A1	P50225	295 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	BAX	Q07812	192 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	FAM78B	Q5VT40	261 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	C10orf113	Q5VZT2	155 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	TMEM182	Q6ZP80	229 aa	Predicted RBP	7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	LINC00305	Q7Z4B0	112 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	BPIFA4P	Q86YQ2	179 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	OR1L4	Q8NGR5	311 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	UHRF2	Q96PU4	802 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	PFDN5	Q99471	154 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	SLC25A31	Q9H0C2	315 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	LYRM2	Q9NU23	88 aa	Predicted RBP	7.54	□□□□□ -1.2
UBR1-207	ENST00000568782	TENM2	Q9NT68	2774 aa		7.54	□□□□□ -1.2
UBR1-207	ENST00000568782		A0A0J9YX75	114 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	TEX48	A0A1B0GUV7	120 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	FAM24A	A6NFZ4	105 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	SOCS3	O14543	225 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	HBE1	P02100	147 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	GIG44	P09565	113 aa	Predicted RBP	7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	FXYD7	P58549	80 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	RHOB	P62745	196 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	RAB32	Q13637	225 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	GDF5OS	Q5U4N7	250 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	NRARP	Q7Z6K4	114 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782		Q8NAQ8	132 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	CSNK1G2-AS1	Q8NCQ2	148 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	SLC50A1	Q9BRV3	221 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	DNAJC4	Q9NNZ3	241 aa		7.53	□□□□□ -1.2
UBR1-207	ENST00000568782	TRAV10	A0A0B4J240	114 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	UBE2L5P	A0A1B0GUS4	154 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782		E5RGE8	158 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	SSNA1	O43805	119 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	MPDU1	O75352	247 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	SPART-AS1	P0CW21	52 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	PET100	P0DJ07	73 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	CXCL2	P19875	107 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	B2M	P61769	119 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	ARL16	Q0P5N6	197 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	LCN15	Q6UWW0	184 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	TMEM252	Q8N6L7	170 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	ZNF709	Q8N972	641 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	LINC00476	Q8WZB0	136 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	NEU1	Q99519	415 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	NMES1	Q9C002	83 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	RFNG	Q9Y644	331 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782		X6R8D5	127 aa		7.52	□□□□□ -1.21
UBR1-207	ENST00000568782	DNAH7	Q8WXX0	4024 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782		A0A087X0K7	114 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	IGLL5	B9A064	214 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782		F6UB75	175 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	RBMY1A1	P0DJD3	496 aa	Known RBP	7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	RBMY1C	P0DJD4	496 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	FGF7	P21781	194 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	HLA-DMB	P28068	263 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	EMP1	P54849	157 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	RBMY1F	Q15415	496 aa	Known RBP	7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	PSG3	Q16557	428 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	RRN3P1	Q2M238	152 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	LRRC37A5P	Q49AS3	106 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	MGST2	Q99735	147 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	SLC35B3	Q9H1N7	401 aa		7.51	□□□□□ -1.21
UBR1-207	ENST00000568782	PXMP4	Q9Y6I8	212 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms