RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CCR6P51684 374 aa10.77□□□□□ -0.69
PALB2-205ENST00000567003 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
PALB2-205ENST00000567003 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.69
PALB2-205ENST00000567003 IL22RA2Q969J5 263 aa10.77□□□□□ -0.69
PALB2-205ENST00000567003 Q9H8V8 135 aa10.77□□□□□ -0.69
PALB2-205ENST00000567003 DUSP14O95147 198 aaKnown RBP10.76□□□□□ -0.69
PALB2-205ENST00000567003 ZNF182P17025 639 aaPredicted RBP10.76□□□□□ -0.69
PALB2-205ENST00000567003 TSPOP30536 169 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 FGL1Q08830 312 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 SAMD13Q5VXD3 122 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 THAP8Q8NA92 274 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 OR51S1Q8NGJ8 323 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 OR1S1Q8NH92 325 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 AP3S1Q92572 193 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 LINC01587Q99440 93 aa10.76□□□□□ -0.69
PALB2-205ENST00000567003 A0A0B4J2A0 478 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 CBY3A6NI87 242 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 BOLA2-SMG1P6H3BVE0 249 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 AKAIN1P0CW23 69 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 ORM2P19652 201 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
PALB2-205ENST00000567003 ZNF738Q8NE65 137 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 CACFD1Q9UGQ2 172 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 SHPKQ9UHJ6 478 aa10.75□□□□□ -0.69
PALB2-205ENST00000567003 A0A0J9YY99 117 aa10.74□□□□□ -0.69
PALB2-205ENST00000567003 AKR1C4P17516 323 aa10.74□□□□□ -0.69
PALB2-205ENST00000567003 HIST1H1AQ02539 215 aaPredicted RBP10.74□□□□□ -0.69
PALB2-205ENST00000567003 CTF1Q16619 201 aa10.74□□□□□ -0.69
PALB2-205ENST00000567003 GPR141Q7Z602 305 aa10.74□□□□□ -0.69
PALB2-205ENST00000567003 CLVS1Q8IUQ0 354 aaPredicted RBP10.74□□□□□ -0.69
PALB2-205ENST00000567003 OR1B1Q8NGR6 318 aa10.74□□□□□ -0.69
PALB2-205ENST00000567003 NOP10Q9NPE3 64 aaKnown RBP10.74□□□□□ -0.69
PALB2-205ENST00000567003 KCNIP3Q9Y2W7 256 aa10.74□□□□□ -0.69
PALB2-205ENST00000567003 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
PALB2-205ENST00000567003 RHOBP62745 196 aa10.73□□□□□ -0.69
PALB2-205ENST00000567003 SSBP1Q04837 148 aaKnown RBP10.73□□□□□ -0.69
PALB2-205ENST00000567003 OR5I1Q13606 314 aa10.73□□□□□ -0.69
PALB2-205ENST00000567003 C15orf40Q8WUR7 153 aa10.73□□□□□ -0.69
PALB2-205ENST00000567003 SMIM4Q8WVI0 70 aa10.73□□□□□ -0.69
PALB2-205ENST00000567003 PRRT1Q99946 306 aa10.73□□□□□ -0.69
PALB2-205ENST00000567003 CTDSP2O14595 271 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 RGS5O15539 181 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 ATP5IP56385 69 aaPredicted RBP10.72□□□□□ -0.69
PALB2-205ENST00000567003 B2MP61769 119 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 RAB11AP62491 216 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 GGNBP1Q5YKI7 109 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 GNPNAT1Q96EK6 184 aaPredicted RBP10.72□□□□□ -0.69
PALB2-205ENST00000567003 C16orf74Q96GX8 76 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 TMEM147Q9BVK8 224 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 Q9H3A6 140 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
PALB2-205ENST00000567003 EPM2AB3EWF7 344 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 PRSS46E5RG02 174 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 H3BRN7 92 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 PITX3O75364 302 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 TAS2R60P59551 318 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 ESRGQ1W209 222 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 BPIFCQ8NFQ6 507 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 OR4D5Q8NGN0 318 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 SLC45A2Q9UMX9 530 aa10.71□□□□□ -0.69
PALB2-205ENST00000567003 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.69
PALB2-205ENST00000567003 CFDP00746 253 aaPredicted RBP10.7□□□□□ -0.7
PALB2-205ENST00000567003 HOXA5P20719 270 aa10.7□□□□□ -0.7
PALB2-205ENST00000567003 MRPS10P82664 201 aaKnown RBP10.7□□□□□ -0.7
PALB2-205ENST00000567003 IL18Q14116 193 aa10.7□□□□□ -0.7
PALB2-205ENST00000567003 TMEM144Q7Z5S9 345 aa10.7□□□□□ -0.7
PALB2-205ENST00000567003 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
PALB2-205ENST00000567003 PARD6GQ9BYG4 376 aaPredicted RBP10.7□□□□□ -0.7
PALB2-205ENST00000567003 MCUBQ9NWR8 336 aa10.7□□□□□ -0.7
PALB2-205ENST00000567003 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
PALB2-205ENST00000567003 ANKRD20A5PA0PJZ0 165 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 H3BP45 60 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 ZNF701M0R085 212 aaPredicted RBP10.69□□□□□ -0.7
PALB2-205ENST00000567003 INAFM2P0DMQ5 153 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
PALB2-205ENST00000567003 AKR1C1Q04828 323 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 GPR82Q96P67 336 aa10.69□□□□□ -0.7
PALB2-205ENST00000567003 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
PALB2-205ENST00000567003 WRBO00258 174 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 CXCL3P19876 107 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 M6PRP20645 277 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 LINC00315P59091 139 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 ACOT7LQ6ZUV0 252 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 TMEM263Q8WUH6 116 aaKnown RBP10.68□□□□□ -0.7
PALB2-205ENST00000567003 UPK3BQ9BT76 320 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 SHANK2-AS3Q9BTD1 123 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 SCP2D1Q9UJQ7 156 aa10.68□□□□□ -0.7
PALB2-205ENST00000567003 DNAH8Q96JB1 4490 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 SMCO3A2RU48 225 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 GAGE7O76087 117 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 SNRPCP09234 159 aaKnown RBP10.67□□□□□ -0.7
PALB2-205ENST00000567003 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms