RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, human

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMPD3-208	ENST00000566723	KIAA1109	Q2LD37	5005 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	LOC102723971	A0A1B0GUV8	181 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	SMCO3	A2RU48	225 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723		H3BRN7	92 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	SSSCA1	O60232	199 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	HBE1	P02100	147 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	FAM222A	Q5U5X8	452 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	AMTN	Q6UX39	209 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	CYP2G1P	Q6ZSU1	146 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	POM121L12	Q8N7R1	296 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	NIPSNAP3B	Q9BS92	247 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	PSENEN	Q9NZ42	101 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	FLVCR2	Q9UPI3	526 aa		10.84	□□□□□ -0.67
SMPD3-208	ENST00000566723	IFNA21	P01568	189 aa		10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	BAK1	Q16611	211 aa		10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	FAM210B	Q96KR6	192 aa		10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	IGF2BP2-AS1	Q96M15	143 aa		10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	SHANK2-AS3	Q9BTD1	123 aa		10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	NACA	E9PAV3	2078 aa		10.83	□□□□□ -0.68
SMPD3-208	ENST00000566723	PMS2P5	A8MQ11	134 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	IL5	P05113	134 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	OR4E1	P0C645	316 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	LINC00869	P0C866	280 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	RAP2B	P61225	183 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	OXA1L	Q15070	435 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	RRN3P1	Q2M238	152 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	LINC00336	Q6ZUF6	198 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	SMIM8	Q96KF7	97 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	HIGD1A	Q9Y241	93 aa		10.82	□□□□□ -0.68
SMPD3-208	ENST00000566723	TRAV8-2	A0A0B4J237	113 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	HYPM	O75409	117 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	CCNK	O75909	580 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	DUSP14	O95147	198 aa	Known RBP	10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	RPL7	P18124	248 aa	Known RBP	10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	BTC	P35070	178 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	CNN1	P51911	297 aa	Known RBP	10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	PLP1	P60201	277 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	SELENOT	P62341	195 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	DLK1	P80370	383 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	C4orf46	Q504U0	113 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	TMEM14EP	Q6UXP3	125 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	RNF182	Q8N6D2	247 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	OR11H7	Q8NGC8	314 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	SDHC	Q99643	169 aa	Predicted RBP	10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	TMEM208	Q9BTX3	173 aa		10.81	□□□□□ -0.68
SMPD3-208	ENST00000566723	DYNC1H1	Q14204	4646 aa	Known RBP	10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	LINC00854	A0A1B0GVQ3	168 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	FNDC10	F2Z333	226 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723		M0R2Z0	102 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	SCGB1D2	O95969	90 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	INS	P01308	110 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	OR5G3	P0C626	314 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	METTL15P1	P0C7V9	234 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	ANXA7	P20073	488 aa	Known RBP	10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	RRAS2	P62070	204 aa	Predicted RBP	10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	FGL1	Q08830	312 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	SPINK13	Q1W4C9	94 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	IGFL4	Q6B9Z1	124 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	ZNF738	Q8NE65	137 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	UHRF2	Q96PU4	802 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723	PCLO	Q9Y6V0	5065 aa		10.8	□□□□□ -0.68
SMPD3-208	ENST00000566723		A0A087X0K7	114 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	CENPX	A8MT69	81 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723		K7EPK0	472 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	HTN3	P15516	51 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	DAD1	P61803	113 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	IAH1	Q2TAA2	248 aa	Predicted RBP	10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	S100A7A	Q86SG5	101 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	NPVF	Q9HCQ7	196 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	PLA2G2E	Q9NZK7	142 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	MGAT4C	Q9UBM8	478 aa		10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	RCL1	Q9Y2P8	373 aa	Known RBP	10.79	□□□□□ -0.68
SMPD3-208	ENST00000566723	BOLA2-SMG1P6	H3BVE0	249 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	CRX	O43186	299 aa	Predicted RBP	10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	TSC22D2	O75157	780 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	TAS2R30	P59541	319 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	SLC38A11	Q08AI6	406 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	UBE2DNL	Q8IWF7	75 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	BAP18	Q8IXM2	172 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	OR10P1	Q8NGE3	313 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	MITD1	Q8WV92	249 aa		10.78	□□□□□ -0.68
SMPD3-208	ENST00000566723	DNAH11	Q96DT5	4516 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723		M0R2N4	97 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	IL7	P13232	177 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	CXCL3	P19876	107 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	B2M	P61769	119 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	CNPY1	Q3B7I2	92 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	TEPP	Q6URK8	271 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	ARL6	Q9H0F7	186 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	RNF24	Q9Y225	148 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723	PKD1	P98161	4303 aa		10.77	□□□□□ -0.69
SMPD3-208	ENST00000566723		A0A1B0GVY2	172 aa		10.76	□□□□□ -0.69
SMPD3-208	ENST00000566723	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.76	□□□□□ -0.69
SMPD3-208	ENST00000566723	HIST1H1A	Q02539	215 aa	Predicted RBP	10.76	□□□□□ -0.69
SMPD3-208	ENST00000566723	LGALS9B	Q3B8N2	356 aa		10.76	□□□□□ -0.69
SMPD3-208	ENST00000566723	PXDC1	Q5TGL8	231 aa		10.76	□□□□□ -0.69
SMPD3-208	ENST00000566723	TMEM88	Q6PEY1	159 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms