RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
CDH1-210ENST00000566612 PPIFP30405 207 aaKnown RBP9.3□□□□□ -0.92
CDH1-210ENST00000566612 ATP5G2Q06055 141 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 COL5A1-AS1Q5SY13 56 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 MSRB2Q9Y3D2 182 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 COL6A3P12111 3177 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 NDUFS7O75251 213 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 IGHV2-70P01814 119 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 APOHP02749 345 aaPredicted RBP9.3□□□□□ -0.92
CDH1-210ENST00000566612 NBL1P41271 181 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 CCDC168Q8NDH2 2452 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 TMEM70Q9BUB7 260 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 LY96Q9Y6Y9 160 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 MYO9AB2RTY4 2548 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 SIAH2O43255 324 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 SNAI2O43623 268 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 PVRIGQ6DKI7 326 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 V9GYV3 84 aa9.3□□□□□ -0.92
CDH1-210ENST00000566612 PDLIM4P50479 330 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 ZNF138P52744 262 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 KMT2EQ8IZD2 1858 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 IGKV2-40A0A087WW87 121 aaPredicted RBP9.29□□□□□ -0.92
CDH1-210ENST00000566612 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
CDH1-210ENST00000566612 MGPP08493 103 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 SAPCD1Q5SSQ6 148 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 TYMSP04818 313 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 NIT1Q86X76 327 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 OR4C5Q8NGB2 326 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 EEF1AKMT3Q96AZ1 226 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 ARHGAP32A7KAX9 2087 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 C15orf32Q32M92 178 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 FAM71F2Q6NXP2 309 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 IGF2-ASQ6U949 168 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 TMEM116Q8NCL8 245 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 FAM168AQ92567 244 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
CDH1-210ENST00000566612 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 C22orf46C9J442 243 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 CGB3P0DN86 165 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 CGB7P0DN87 165 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 NMUP48645 174 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 LINC00311Q8N616 119 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 PIMREGQ9BSJ6 248 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 CYB5R2Q6BCY4 276 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 BRD3OSQ6XYD6 125 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 Q8NA96 180 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 Q8TAT8 98 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 CCL19Q99731 98 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 A1L4Q6 167 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 F2Z2F3 143 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 OR10AG1Q8NH19 301 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 FRYQ5TBA9 3013 aa9.28□□□□□ -0.92
CDH1-210ENST00000566612 USP9YO00507 2555 aaPredicted RBP9.27□□□□□ -0.92
CDH1-210ENST00000566612 GNLYP22749 145 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 PRTN3P24158 256 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 BPESC1Q9GZL8 116 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 IGLC7A0M8Q6 106 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 TCF21O43680 179 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 GPX1P07203 203 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 FRMD6-AS1P0C7T7 363 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 EIF4EBP1Q13541 118 aaPredicted RBP9.27□□□□□ -0.93
CDH1-210ENST00000566612 CR1LQ2VPA4 569 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 C11orf52Q96A22 123 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 PRELID3AQ96N28 172 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 MIEN1Q9BRT3 115 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 KAAG1Q9UBP8 84 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 IGKV3-20P01619 116 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
CDH1-210ENST00000566612 OR10J3Q5JRS4 329 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 BEND2Q8NDZ0 799 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 MCRIP2Q9BUT9 160 aaKnown RBP9.27□□□□□ -0.93
CDH1-210ENST00000566612 PRDM13Q9H4Q3 707 aa9.27□□□□□ -0.93
CDH1-210ENST00000566612 MRPL36Q9P0J6 103 aaKnown RBP9.27□□□□□ -0.93
CDH1-210ENST00000566612 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 PYGO2Q9BRQ0 406 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 MYO18BQ8IUG5 2567 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 NUPR1O60356 82 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 LINC00614P0C842 121 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 UQCRFS1P47985 274 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 TM4SF20Q53R12 229 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 OR10J6PQ8NGY7 276 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 ZFP30Q9Y2G7 519 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 TLN2Q9Y4G6 2542 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 TRAV40A0A0B4J280 105 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 YPEL3P61236 119 aaPredicted RBP9.26□□□□□ -0.93
CDH1-210ENST00000566612 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 FXYD5Q96DB9 178 aa9.26□□□□□ -0.93
CDH1-210ENST00000566612 TDGF1P3P51864 188 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 SLAQ13239 276 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 ZNF841Q6ZN19 808 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 RNF5Q99942 180 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 FREM2Q5SZK8 3169 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 EFNA4P52798 201 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 HIST1H1AQ02539 215 aaPredicted RBP9.25□□□□□ -0.93
CDH1-210ENST00000566612 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms