RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 LOC102724200A0A096LPH7 203 aaPredicted RBP15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 COX7A2P2O60397 106 aa15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 RPL7P18124 248 aaKnown RBP15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 DEFB131AP59861 70 aa15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 B2MP61769 119 aa15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 SNRPD3P62318 126 aaKnown RBP15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 APRG1Q8IVJ8 170 aa15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 PFDN5Q99471 154 aa15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 PXMP4Q9Y6I8 212 aa15.6■□□□□ 0.09
SHCBP1-205ENST00000566016 ZNF688P0C7X2 276 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 OR1L4Q8NGR5 311 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 OR2T35Q8NGX2 323 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 TMEM37Q8WXS4 190 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 PARD6GQ9BYG4 376 aaPredicted RBP15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 SOCS3O14543 225 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 Q5BKY6 102 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 C10orf113Q5VZT2 155 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 LEMD1Q68G75 181 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 LINC00305Q7Z4B0 112 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 DNAJC4Q9NNZ3 241 aa15.59■□□□□ 0.09
SHCBP1-205ENST00000566016 KIR2DL5BA0A0G2JN68 375 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 KIR2DL5BA0A0G2JPC4 375 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 ISLRO14498 428 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 PSMB3P49720 205 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 KIR2DL5AQ8N109 375 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 KIR2DL5BQ8NHK3 375 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 SPATA25Q9BR10 227 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 ZMAT4Q9H898 229 aa15.58■□□□□ 0.08
SHCBP1-205ENST00000566016 HUWE1Q7Z6Z7 4374 aaKnown RBP15.57■□□□□ 0.08
SHCBP1-205ENST00000566016 APOC4P55056 127 aa15.57■□□□□ 0.08
SHCBP1-205ENST00000566016 ZNF709Q8N972 641 aa15.57■□□□□ 0.08
SHCBP1-205ENST00000566016 GATAD1Q8WUU5 269 aa15.57■□□□□ 0.08
SHCBP1-205ENST00000566016 C17orf112F2Z3M2 114 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 G3V3Q6 166 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 IFNA5P01569 189 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 ID1P41134 155 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 ZNF124Q15973 351 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 PSMG4Q5JS54 123 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 SMIM3Q9BZL3 60 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 U3KQK5 164 aa15.56■□□□□ 0.08
SHCBP1-205ENST00000566016 A0A087X0K7 114 aa15.55■□□□□ 0.08
SHCBP1-205ENST00000566016 INO80EQ8NBZ0 244 aaPredicted RBP15.55■□□□□ 0.08
SHCBP1-205ENST00000566016 C17orf77Q96MU5 243 aa15.55■□□□□ 0.08
SHCBP1-205ENST00000566016 RSG1Q9BU20 258 aa15.55■□□□□ 0.08
SHCBP1-205ENST00000566016 UBE2CO00762 179 aa15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 MRPS12O15235 138 aaKnown RBP15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 ATF4P18848 351 aaPredicted RBP15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 ZNF266Q14584 549 aa15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 BPIFA4PQ86YQ2 179 aa15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 TNFSF18Q9UNG2 199 aa15.54■□□□□ 0.08
SHCBP1-205ENST00000566016 RNF222A6NCQ9 220 aa15.53■□□□□ 0.08
SHCBP1-205ENST00000566016 MORN5Q5VZ52 161 aa15.53■□□□□ 0.08
SHCBP1-205ENST00000566016 SCGB1C1Q8TD33 95 aa15.53■□□□□ 0.08
SHCBP1-205ENST00000566016 RCHY1Q96PM5 261 aa15.53■□□□□ 0.08
SHCBP1-205ENST00000566016 WFDC1Q9HC57 220 aa15.53■□□□□ 0.08
SHCBP1-205ENST00000566016 FXYD6-FXYD2A0A087WZ82 144 aa15.52■□□□□ 0.08
SHCBP1-205ENST00000566016 Q6ZWC4 215 aa15.52■□□□□ 0.08
SHCBP1-205ENST00000566016 STHQ8IWL8 128 aa15.52■□□□□ 0.08
SHCBP1-205ENST00000566016 CXCL2P19875 107 aa15.52■□□□□ 0.07
SHCBP1-205ENST00000566016 TRPT1Q86TN4 253 aaKnown RBP15.52■□□□□ 0.07
SHCBP1-205ENST00000566016 RPL35AP18077 110 aaKnown RBP15.51■□□□□ 0.07
SHCBP1-205ENST00000566016 Q6ZNX1 250 aa15.51■□□□□ 0.07
SHCBP1-205ENST00000566016 C16orf92Q96LL3 132 aa15.51■□□□□ 0.07
SHCBP1-205ENST00000566016 GCSAMLQ5JQS6 135 aa15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 LCN15Q6UWW0 184 aa15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 MRPL32Q9BYC8 188 aaKnown RBP15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 CSTL1Q9H114 145 aa15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 HRH4Q9H3N8 390 aa15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 TP53TG1Q9Y2A0 90 aa15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 TIMM9Q9Y5J7 89 aa15.5■□□□□ 0.07
SHCBP1-205ENST00000566016 IGLC2P0DOY2 106 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 HLA-DRB4P13762 266 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 ACTL10Q5JWF8 245 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 SPATA31B1PQ5VZV4 182 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 FOXI2Q6ZQN5 318 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 TMEM14CQ9P0S9 112 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 HLA-DRB4X5D2U9 266 aa15.49■□□□□ 0.07
SHCBP1-205ENST00000566016 KNCNA6PVL3 124 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 SPP1P10451 314 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 GUK1Q16774 197 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 FAM78BQ5VT40 261 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 LINC00052Q96N35 136 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 SLC50A1Q9BRV3 221 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 SAV1Q9H4B6 383 aaPredicted RBP15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 RPRMQ9NS64 109 aa15.48■□□□□ 0.07
SHCBP1-205ENST00000566016 TRAV8-2A0A0B4J237 113 aa15.47■□□□□ 0.07
SHCBP1-205ENST00000566016 H3BMM0 161 aa15.47■□□□□ 0.07
SHCBP1-205ENST00000566016 TMEM41BQ5BJD5 291 aa15.47■□□□□ 0.07
SHCBP1-205ENST00000566016 FFAR4Q5NUL3 377 aa15.47■□□□□ 0.07
SHCBP1-205ENST00000566016 CLUHP3Q96NS8 147 aa15.47■□□□□ 0.07
SHCBP1-205ENST00000566016 MORN3Q6PF18 240 aaPredicted RBP15.46■□□□□ 0.07
SHCBP1-205ENST00000566016 PSMG3Q9BT73 122 aaPredicted RBP15.46■□□□□ 0.07
SHCBP1-205ENST00000566016 TRAV5A0A0B4J249 113 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 ARPC5O15511 151 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 ZNF253O75346 499 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 ZNF345Q14585 488 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 OR2G3Q8NGZ4 309 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 C20orf173Q96LM9 149 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 RETNQ9HD89 108 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms