RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLC16A13Q7RTY0 426 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
SF3B3-206ENST00000565990 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 RAB24Q969Q5 203 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 PARLQ9H300 379 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 VWFP04275 2813 aa9.74□□□□□ -0.85
SF3B3-206ENST00000565990 TRBV7-1A0A0A6YYK4 115 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 TGIF2-C20orf24A0A0A6YYL0 155 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 PRSS46E5RG02 174 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 MT-CO2P00403 227 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 TRGC2P03986 189 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 LGALS1P09382 135 aaKnown RBP9.73□□□□□ -0.85
SF3B3-206ENST00000565990 NPY1RP25929 384 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 GPX4P36969 197 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-206ENST00000565990 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
SF3B3-206ENST00000565990 RAB31Q13636 194 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 MLANAQ16655 118 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 OR51G1Q8NGK1 321 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 ZNF502Q8TBZ5 544 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 TXN2Q99757 166 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 NPVFQ9HCQ7 196 aa9.73□□□□□ -0.85
SF3B3-206ENST00000565990 PPP5D1E7EU14 171 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-206ENST00000565990 CXorf1O96002 111 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 CLEC3BP05452 202 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 TRGC1P0CF51 173 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 ADIRFQ15847 76 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 TMEM183AQ8IXX5 376 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 KLHL30-AS1Q8NEE0 82 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 CACNG8Q8WXS5 425 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 EEF1AKMT3Q96AZ1 226 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 CCDC140Q96MF4 163 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 PFDN5Q99471 154 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
SF3B3-206ENST00000565990 SLC25A22Q9H936 323 aa9.72□□□□□ -0.85
SF3B3-206ENST00000565990 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
SF3B3-206ENST00000565990 A0A1W2PPV4 95 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 IGHV3-11P01762 117 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 STAG3L2P0CL84 134 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 STAG3L3P0CL85 134 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 MYCNOSP40205 109 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 GALR1P47211 349 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 CD69Q07108 199 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 FHL3Q13643 280 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 C8orf86Q6ZUL3 223 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 TMEM116Q8NCL8 245 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 OR1N2Q8NGR9 330 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 RAX2Q96IS3 184 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 OR4F4Q96R69 305 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 LSM4Q9Y4Z0 139 aaKnown RBP9.71□□□□□ -0.86
SF3B3-206ENST00000565990 URGCP-MRPS24S4R325 110 aa9.71□□□□□ -0.86
SF3B3-206ENST00000565990 A0A1W2PRX2 142 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 C11orf94C9JXX5 98 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 CCL24O00175 119 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 CTSGP08311 255 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 RPL29P47914 159 aaKnown RBP9.7□□□□□ -0.86
SF3B3-206ENST00000565990 MFAP4P55083 255 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 RPL19P84098 196 aaKnown RBP9.7□□□□□ -0.86
SF3B3-206ENST00000565990 KHDC1LQ5JSQ8 128 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 OR11H1Q8NG94 326 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 OR4F17Q8NGA8 305 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 OR4X1Q8NH49 305 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 FRZBQ92765 325 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 C11orf52Q96A22 123 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 MRPL36Q9P0J6 103 aaKnown RBP9.7□□□□□ -0.86
SF3B3-206ENST00000565990 PKD1L1Q8TDX9 2849 aa9.7□□□□□ -0.86
SF3B3-206ENST00000565990 IFITM10A6NMD0 228 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 M0QZ24 198 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 PAGE4O60829 102 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 YIF1AO95070 293 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 IGHV3-23P01764 117 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 RHOBP62745 196 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 ANK2Q01484 3957 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 PYY3Q5JQD4 70 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 TREML4Q6UXN2 200 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 GPHB5Q86YW7 130 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 SLC35E1Q96K37 410 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 RNF2Q99496 336 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 GGTLC1Q9BX51 225 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 S4R3C0 116 aa9.69□□□□□ -0.86
SF3B3-206ENST00000565990 IGHV4OR15-8A0A075B7B6 117 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 A0A087WW49 117 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 IGHV3-21A0A0B4J1V1 117 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 C9JCJ5 164 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 LINC01619G3V211 115 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 BMPR1BO00238 502 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 GCGP01275 180 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 TRBV12-3P01733 135 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 IGHV3-48P01763 117 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 KLF5Q13887 457 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-206ENST00000565990 GAMTQ14353 236 aa9.68□□□□□ -0.86
SF3B3-206ENST00000565990 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms