RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TMEM144Q7Z5S9 345 aa16.89■□□□□ 0.29
RAB40C-209ENST00000565511 NDUFAF3Q9BU61 184 aa16.89■□□□□ 0.29
RAB40C-209ENST00000565511 DYNC1H1Q14204 4646 aaKnown RBP16.89■□□□□ 0.29
RAB40C-209ENST00000565511 SMCO3A2RU48 225 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 TMEM189A5PLL7 270 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 SSSCA1O60232 199 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 ANXA7P20073 488 aaKnown RBP16.88■□□□□ 0.29
RAB40C-209ENST00000565511 MEOX2P50222 304 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 SPANXN2Q5MJ10 180 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 TMEM147Q9BVK8 224 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 PSENENQ9NZ42 101 aa16.88■□□□□ 0.29
RAB40C-209ENST00000565511 LOC102723971A0A1B0GUV8 181 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 OR4E1P0C645 316 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 POM121L12Q8N7R1 296 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 SHANK2-AS3Q9BTD1 123 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 SLC25A39Q9BZJ4 359 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-209ENST00000565511 GOLT1BQ9Y3E0 138 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 YTHDF2Q9Y5A9 579 aaKnown RBP16.87■□□□□ 0.29
RAB40C-209ENST00000565511 NACAE9PAV3 2078 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 DNAH11Q96DT5 4516 aa16.87■□□□□ 0.29
RAB40C-209ENST00000565511 M0R2Z0 102 aa16.86■□□□□ 0.29
RAB40C-209ENST00000565511 CRXO43186 299 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-209ENST00000565511 CNN1P51911 297 aaKnown RBP16.86■□□□□ 0.29
RAB40C-209ENST00000565511 RRAS2P62070 204 aaPredicted RBP16.86■□□□□ 0.29
RAB40C-209ENST00000565511 OR11H7Q8NGC8 314 aa16.86■□□□□ 0.29
RAB40C-209ENST00000565511 UHRF2Q96PU4 802 aa16.86■□□□□ 0.29
RAB40C-209ENST00000565511 C7orf50Q9BRJ6 194 aaKnown RBP16.86■□□□□ 0.29
RAB40C-209ENST00000565511 NIPSNAP3BQ9BS92 247 aa16.86■□□□□ 0.29
RAB40C-209ENST00000565511 PKD1P98161 4303 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 A0A1B0GVY2 172 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 SPINK13Q1W4C9 94 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 SAMD13Q5VXD3 122 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 TRIQKQ629K1 86 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 TMEM14EPQ6UXP3 125 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 IGF2BP2-AS1Q96M15 143 aa16.85■□□□□ 0.29
RAB40C-209ENST00000565511 NAP1L6A6NFF2 107 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 M0R2N4 97 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 HBE1P02100 147 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 IL5P05113 134 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 METTL15P1P0C7V9 234 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 P0DMU3 169 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 FAM231AP0DMU4 169 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 FAM231CP0DMU5 169 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 HTN3P15516 51 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 FGL1Q08830 312 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 SMIM8Q96KF7 97 aa16.84■□□□□ 0.29
RAB40C-209ENST00000565511 RCL1Q9Y2P8 373 aaKnown RBP16.84■□□□□ 0.29
RAB40C-209ENST00000565511 ZNF701M0R085 212 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-209ENST00000565511 RTL8CO15255 209 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 LINC00869P0C866 280 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 ARL16Q0P5N6 197 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 PATE2Q6UY27 113 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 BAP18Q8IXM2 172 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 GPR82Q96P67 336 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 HIGD1AQ9Y241 93 aa16.83■□□□□ 0.28
RAB40C-209ENST00000565511 ZNF705GA8MUZ8 300 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-209ENST00000565511 SCGB1D2O95969 90 aa16.82■□□□□ 0.28
RAB40C-209ENST00000565511 INPP1P49441 399 aa16.82■□□□□ 0.28
RAB40C-209ENST00000565511 PLP1P60201 277 aa16.82■□□□□ 0.28
RAB40C-209ENST00000565511 DLK1P80370 383 aa16.82■□□□□ 0.28
RAB40C-209ENST00000565511 RRN3P1Q2M238 152 aa16.82■□□□□ 0.28
RAB40C-209ENST00000565511 MRPS12O15235 138 aaKnown RBP16.81■□□□□ 0.28
RAB40C-209ENST00000565511 HYPMO75409 117 aa16.81■□□□□ 0.28
RAB40C-209ENST00000565511 SLC38A11Q08AI6 406 aa16.81■□□□□ 0.28
RAB40C-209ENST00000565511 IAH1Q2TAA2 248 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-209ENST00000565511 C4orf46Q504U0 113 aa16.81■□□□□ 0.28
RAB40C-209ENST00000565511 ZBTB8BQ8NAP8 495 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-209ENST00000565511 TRAV12-2A0A075B6T6 113 aa16.8■□□□□ 0.28
RAB40C-209ENST00000565511 IFNA21P01568 189 aa16.8■□□□□ 0.28
RAB40C-209ENST00000565511 OR5G3P0C626 314 aa16.8■□□□□ 0.28
RAB40C-209ENST00000565511 IL7P13232 177 aa16.8■□□□□ 0.28
RAB40C-209ENST00000565511 OXA1LQ15070 435 aa16.8■□□□□ 0.28
RAB40C-209ENST00000565511 ZNF738Q8NE65 137 aa16.8■□□□□ 0.28
RAB40C-209ENST00000565511 TEX48A0A1B0GUV7 120 aa16.79■□□□□ 0.28
RAB40C-209ENST00000565511 CCSO14618 274 aa16.79■□□□□ 0.28
RAB40C-209ENST00000565511 RAP2BP61225 183 aa16.79■□□□□ 0.28
RAB40C-209ENST00000565511 TMEM88Q6PEY1 159 aa16.79■□□□□ 0.28
RAB40C-209ENST00000565511 IGLV2-18A0A075B6J9 118 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 A0A087X0K7 114 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 PLAC8L1A1L4L8 177 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 K7EPK0 472 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 DUSP14O95147 198 aaKnown RBP16.78■□□□□ 0.28
RAB40C-209ENST00000565511 INSP01308 110 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 MBPP02686 304 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-209ENST00000565511 SNRPCP09234 159 aaKnown RBP16.78■□□□□ 0.28
RAB40C-209ENST00000565511 RPL7P18124 248 aaKnown RBP16.78■□□□□ 0.28
RAB40C-209ENST00000565511 CXCL3P19876 107 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 AZU1P20160 251 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 LINC00336Q6ZUF6 198 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 MITD1Q8WV92 249 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 TMEM208Q9BTX3 173 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 ARL6Q9H0F7 186 aa16.78■□□□□ 0.28
RAB40C-209ENST00000565511 PLA2G10O15496 165 aa16.77■□□□□ 0.28
RAB40C-209ENST00000565511 DAD1P61803 113 aa16.77■□□□□ 0.28
RAB40C-209ENST00000565511 SELENOTP62341 195 aa16.77■□□□□ 0.28
RAB40C-209ENST00000565511 HIST1H1AQ02539 215 aaPredicted RBP16.77■□□□□ 0.28
RAB40C-209ENST00000565511 FAM210BQ96KR6 192 aa16.77■□□□□ 0.28
RAB40C-209ENST00000565511 GSKIPQ9P0R6 139 aa16.77■□□□□ 0.28
RAB40C-209ENST00000565511 BOLA2-SMG1P6H3BVE0 249 aa16.76■□□□□ 0.27
RAB40C-209ENST00000565511 TSC22D2O75157 780 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms