RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SLC35B1P78383 322 aa15.12■□□□□ 0.01
CLN6-205ENST00000564846 LINC01551Q86U37 167 aa15.12■□□□□ 0.01
CLN6-205ENST00000564846 TMEM242Q9NWH2 141 aa15.12■□□□□ 0.01
CLN6-205ENST00000564846 PGPA6NDG6 321 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 CXorf65A6NEN9 183 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 PPP5D1E7EU14 171 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 RPL7P18124 248 aaKnown RBP15.11■□□□□ 0.01
CLN6-205ENST00000564846 FAM209BQ5JX69 171 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 C15orf54Q8N8G6 183 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 HIST1H2BAQ96A08 127 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 CTDSP1Q9GZU7 261 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 Q9H3A6 140 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 TRBV20OR9-2A0A075B6H5 130 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 TRBV19A0A075B6N1 114 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 MT-ND4LP03901 98 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 SCGB2A2Q13296 93 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 Q8N2B8 174 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 OR4X2Q8NGF9 303 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 TMEM160Q9NX00 188 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 LY96Q9Y6Y9 160 aa15.11■□□□□ 0.01
CLN6-205ENST00000564846 PEX7O00628 323 aa15.1■□□□□ 0.01
CLN6-205ENST00000564846 LYPD1Q8N2G4 141 aa15.1■□□□□ 0.01
CLN6-205ENST00000564846 C5orf17Q8NAS9 161 aa15.1■□□□□ 0.01
CLN6-205ENST00000564846 OTORQ9NRC9 128 aa15.1■□□□□ 0.01
CLN6-205ENST00000564846 EPDR1Q9UM22 224 aa15.1■□□□□ 0.01
CLN6-205ENST00000564846 MXRA5Q9NR99 2828 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 IGHV3-11P01762 117 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 SLC25A5P05141 298 aaKnown RBP15.09■□□□□ 0.01
CLN6-205ENST00000564846 PDE6HQ13956 83 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 RNF212Q495C1 297 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 TEX38Q6PEX7 206 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 OR8I2Q8N0Y5 310 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 DUX5Q96PT3 197 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 METTL26Q96S19 204 aa15.09■□□□□ 0.01
CLN6-205ENST00000564846 TMA7Q9Y2S6 64 aaKnown RBP15.09■□□□□ 0.01
CLN6-205ENST00000564846 CLPSL1A2RUU4 121 aa15.08■□□□□ 0.01
CLN6-205ENST00000564846 H3BTX0 84 aa15.08■□□□□ 0.01
CLN6-205ENST00000564846 GNG4P50150 75 aa15.08■□□□□ 0.01
CLN6-205ENST00000564846 CNN1P51911 297 aaKnown RBP15.08■□□□□ 0.01
CLN6-205ENST00000564846 TAS2R60P59551 318 aa15.08■□□□□ 0.01
CLN6-205ENST00000564846 ISOC2Q96AB3 205 aa15.08■□□□□ 0.01
CLN6-205ENST00000564846 ANAPC16Q96DE5 110 aa15.08■□□□□ 0.01
CLN6-205ENST00000564846 IGHV3OR16-8A0A075B7F1 116 aa15.08■□□□□ 0
CLN6-205ENST00000564846 COLCA2A8K830 154 aa15.08■□□□□ 0
CLN6-205ENST00000564846 CLDN34H7C241 214 aa15.08■□□□□ 0
CLN6-205ENST00000564846 NDUFA4O00483 81 aa15.08■□□□□ 0
CLN6-205ENST00000564846 TRBV12-3P01733 135 aa15.08■□□□□ 0
CLN6-205ENST00000564846 FOXE3Q13461 319 aa15.08■□□□□ 0
CLN6-205ENST00000564846 LCNL1Q6ZST4 164 aa15.08■□□□□ 0
CLN6-205ENST00000564846 GPR82Q96P67 336 aa15.08■□□□□ 0
CLN6-205ENST00000564846 CDC42EP3Q9UKI2 254 aa15.08■□□□□ 0
CLN6-205ENST00000564846 BUB3O43684 328 aa15.07■□□□□ 0
CLN6-205ENST00000564846 ELANEP08246 267 aa15.07■□□□□ 0
CLN6-205ENST00000564846 CENPWQ5EE01 88 aa15.07■□□□□ 0
CLN6-205ENST00000564846 C1orf194Q5T5A4 169 aa15.07■□□□□ 0
CLN6-205ENST00000564846 OCC1Q8TAD7 63 aa15.07■□□□□ 0
CLN6-205ENST00000564846 ATG101Q9BSB4 218 aa15.07■□□□□ 0
CLN6-205ENST00000564846 PGPEP1LA6NFU8 196 aa15.06■□□□□ 0
CLN6-205ENST00000564846 DNAJC9-AS1A6NH13 148 aa15.06■□□□□ 0
CLN6-205ENST00000564846 CD99P14209 185 aa15.06■□□□□ 0
CLN6-205ENST00000564846 RPL15P61313 204 aaKnown RBP15.06■□□□□ 0
CLN6-205ENST00000564846 CMTM2Q8TAZ6 248 aa15.06■□□□□ 0
CLN6-205ENST00000564846 TLN2Q9Y4G6 2542 aa15.06■□□□□ 0
CLN6-205ENST00000564846 GGCTO75223 188 aaKnown RBP15.06■□□□□ 0
CLN6-205ENST00000564846 GNG5P63218 68 aa15.06■□□□□ 0
CLN6-205ENST00000564846 SIGLEC15Q6ZMC9 328 aa15.06■□□□□ 0
CLN6-205ENST00000564846 C17orf77Q96MU5 243 aa15.06■□□□□ 0
CLN6-205ENST00000564846 AURKAIP1Q9NWT8 199 aaPredicted RBP15.06■□□□□ 0
CLN6-205ENST00000564846 PEF1Q9UBV8 284 aaKnown RBP15.06■□□□□ 0
CLN6-205ENST00000564846 PPP1R2P9O14990 202 aa15.05■□□□□ -0
CLN6-205ENST00000564846 S100A9P06702 114 aaKnown RBP15.05■□□□□ -0
CLN6-205ENST00000564846 C10orf99Q6UWK7 81 aa15.05■□□□□ -0
CLN6-205ENST00000564846 YPEL4Q96NS1 127 aa15.05■□□□□ -0
CLN6-205ENST00000564846 U3KQE9 123 aa15.05■□□□□ -0
CLN6-205ENST00000564846 H7BYZ3 331 aa15.04■□□□□ -0
CLN6-205ENST00000564846 TCRAP04437 139 aa15.04■□□□□ -0
CLN6-205ENST00000564846 PSG9Q00887 426 aa15.04■□□□□ -0
CLN6-205ENST00000564846 TMEM183BQ1AE95 376 aa15.04■□□□□ -0
CLN6-205ENST00000564846 EXOC3-AS1Q8N2X6 119 aa15.04■□□□□ -0
CLN6-205ENST00000564846 FAM24BQ8N5W8 94 aa15.04■□□□□ -0
CLN6-205ENST00000564846 RNF152Q8N8N0 203 aa15.04■□□□□ -0
CLN6-205ENST00000564846 IGF2BP2-AS1Q96M15 143 aa15.04■□□□□ -0
CLN6-205ENST00000564846 LINC00479Q96M42 142 aa15.04■□□□□ -0
CLN6-205ENST00000564846 SERTAD4Q9NUC0 356 aa15.04■□□□□ -0
CLN6-205ENST00000564846 KLF12Q9Y4X4 402 aa15.04■□□□□ -0
CLN6-205ENST00000564846 ZNF253O75346 499 aa15.03■□□□□ -0
CLN6-205ENST00000564846 ATF4P18848 351 aaPredicted RBP15.03■□□□□ -0
CLN6-205ENST00000564846 MYOZ3Q8TDC0 251 aa15.03■□□□□ -0
CLN6-205ENST00000564846 SFRP2Q96HF1 295 aa15.03■□□□□ -0
CLN6-205ENST00000564846 AAMDCQ9H7C9 122 aa15.03■□□□□ -0
CLN6-205ENST00000564846 FAM181BA6NEQ2 426 aa15.03■□□□□ -0
CLN6-205ENST00000564846 RPLP1P05386 114 aaKnown RBP15.03■□□□□ -0
CLN6-205ENST00000564846 SMAD5-AS1Q9Y6J3 95 aa15.03■□□□□ -0
CLN6-205ENST00000564846 A0A087X0K7 114 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 K7EN84 100 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 SLC17A3O00476 420 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 GALR1P47211 349 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 UBE2G1P62253 170 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 ELOBQ15370 118 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 UNQ9165/PRO28630Q6UXU0 137 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms