RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 DCANP1Q8TF63 244 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 GATAD1Q8WUU5 269 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 AQP10Q96PS8 301 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 SCRT1Q9BWW7 348 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 ZMAT4Q9H898 229 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 MAP6D1Q9H9H5 199 aa11.89□□□□□ -0.51
RAB40C-208ENST00000564703 SEPSECSQ9HD40 501 aaKnown RBP11.89□□□□□ -0.51
RAB40C-208ENST00000564703 ZNF266Q14584 549 aa11.88□□□□□ -0.51
RAB40C-208ENST00000564703 TMEM37Q8WXS4 190 aa11.88□□□□□ -0.51
RAB40C-208ENST00000564703 SLC25A32Q9H2D1 315 aa11.88□□□□□ -0.51
RAB40C-208ENST00000564703 RBMY1BA6NDE4 496 aaKnown RBP11.87□□□□□ -0.51
RAB40C-208ENST00000564703 RBMY1EA6NEQ0 496 aaKnown RBP11.87□□□□□ -0.51
RAB40C-208ENST00000564703 RBMY1DP0C7P1 496 aaKnown RBP11.87□□□□□ -0.51
RAB40C-208ENST00000564703 HAGHQ16775 308 aa11.87□□□□□ -0.51
RAB40C-208ENST00000564703 PSMG4Q5JS54 123 aa11.87□□□□□ -0.51
RAB40C-208ENST00000564703 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
RAB40C-208ENST00000564703 LRRC20Q8TCA0 184 aa11.87□□□□□ -0.51
RAB40C-208ENST00000564703 C16orf92Q96LL3 132 aa11.87□□□□□ -0.51
RAB40C-208ENST00000564703 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
RAB40C-208ENST00000564703 APOC4P55056 127 aa11.86□□□□□ -0.51
RAB40C-208ENST00000564703 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
RAB40C-208ENST00000564703 Q6ZNX1 250 aa11.86□□□□□ -0.51
RAB40C-208ENST00000564703 STHQ8IWL8 128 aa11.86□□□□□ -0.51
RAB40C-208ENST00000564703 FAM24BQ8N5W8 94 aa11.86□□□□□ -0.51
RAB40C-208ENST00000564703 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
RAB40C-208ENST00000564703 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
RAB40C-208ENST00000564703 TNFSF18Q9UNG2 199 aa11.86□□□□□ -0.51
RAB40C-208ENST00000564703 BORCS7-ASMTA0A0B4J1R7 106 aa11.85□□□□□ -0.51
RAB40C-208ENST00000564703 ISLRO14498 428 aa11.85□□□□□ -0.51
RAB40C-208ENST00000564703 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
RAB40C-208ENST00000564703 PSMB3P49720 205 aa11.85□□□□□ -0.51
RAB40C-208ENST00000564703 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
RAB40C-208ENST00000564703 ARPC5O15511 151 aa11.84□□□□□ -0.51
RAB40C-208ENST00000564703 ZNF124Q15973 351 aa11.84□□□□□ -0.51
RAB40C-208ENST00000564703 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
RAB40C-208ENST00000564703 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
RAB40C-208ENST00000564703 MFFQ9GZY8 342 aa11.84□□□□□ -0.51
RAB40C-208ENST00000564703 UBE2CO00762 179 aa11.83□□□□□ -0.52
RAB40C-208ENST00000564703 SPATA25Q9BR10 227 aa11.83□□□□□ -0.52
RAB40C-208ENST00000564703 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
RAB40C-208ENST00000564703 TRAV5A0A0B4J249 113 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 TAAR5O14804 337 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 ACOT6Q3I5F7 207 aaPredicted RBP11.82□□□□□ -0.52
RAB40C-208ENST00000564703 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 CSTL1Q9H114 145 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 U3KQK5 164 aa11.82□□□□□ -0.52
RAB40C-208ENST00000564703 A0A087X0K7 114 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 RNF222A6NCQ9 220 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 GUK1Q16774 197 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 GCSAMLQ5JQS6 135 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 MORN5Q5VZ52 161 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 EBLN2Q6P2I7 272 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 HSD17B11Q8NBQ5 300 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
RAB40C-208ENST00000564703 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
RAB40C-208ENST00000564703 hCG_2014768A0A024R1R8 64 aa11.8□□□□□ -0.52
RAB40C-208ENST00000564703 A0A1W2PPV4 95 aa11.8□□□□□ -0.52
RAB40C-208ENST00000564703 SOCS3O14543 225 aa11.8□□□□□ -0.52
RAB40C-208ENST00000564703 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
RAB40C-208ENST00000564703 RHOBP62745 196 aa11.8□□□□□ -0.52
RAB40C-208ENST00000564703 LCN15Q6UWW0 184 aa11.8□□□□□ -0.52
RAB40C-208ENST00000564703 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
RAB40C-208ENST00000564703 A0A0D9SG52 128 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 HMSDA8MTL9 139 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 G3V3Q6 166 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 JTBO76095 146 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 CXCL2P19875 107 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 M6PRP20645 277 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 TAS2R45P59539 299 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 SPATA31B1PQ5VZV4 182 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 RCHY1Q96PM5 261 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 SLC50A1Q9BRV3 221 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 HRH4Q9H3N8 390 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 TGP01266 2768 aa11.79□□□□□ -0.52
RAB40C-208ENST00000564703 DNAH3Q8TD57 4116 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 MRPS12O15235 138 aaKnown RBP11.78□□□□□ -0.52
RAB40C-208ENST00000564703 MBP02144 154 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
RAB40C-208ENST00000564703 HIST1H1EP10412 219 aaKnown RBP11.78□□□□□ -0.52
RAB40C-208ENST00000564703 SPP1P10451 314 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 SERF2P84101 59 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 RPL7L1Q6DKI1 246 aaKnown RBP11.78□□□□□ -0.52
RAB40C-208ENST00000564703 MORN3Q6PF18 240 aaPredicted RBP11.78□□□□□ -0.52
RAB40C-208ENST00000564703 FOXI2Q6ZQN5 318 aa11.78□□□□□ -0.52
RAB40C-208ENST00000564703 Q6ZWC4 215 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms