RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
CLK3-215ENST00000564353 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
CLK3-215ENST00000564353 TPPP3Q9BW30 176 aa10.74□□□□□ -0.69
CLK3-215ENST00000564353 NCOR2Q9Y618 2525 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 TRAV9-1A0A075B6T8 112 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 IGHV3-35A0A0C4DH35 117 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 TIMM23O14925 209 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 APOBEC3AP31941 199 aaPredicted RBP10.73□□□□□ -0.69
CLK3-215ENST00000564353 MC5RP33032 325 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 HES1Q14469 280 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 TEX43Q6ZNM6 134 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 ERASQ7Z444 233 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 NIT1Q86X76 327 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 Q8N976 141 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 CHODLQ9H9P2 273 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 JKAMPQ9P055 326 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 HLA-DQA1P01909 254 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 SPATA45Q537H7 98 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 Q56UQ5 140 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 GOLT1AQ6ZVE7 132 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
CLK3-215ENST00000564353 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 GTSF1Q8WW33 167 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 CLEC7AQ9BXN2 247 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 ARL2-SNX15V9GYD0 113 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 HSBP1O75506 76 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 IGLV1-47P01700 117 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 LINC00311Q8N616 119 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 OR4A5Q8NH83 315 aa10.72□□□□□ -0.69
CLK3-215ENST00000564353 TRBV9A0A0B4J1U6 114 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 MT-ND6P03923 174 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 LGALS7P47929 136 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 OCIAD2Q56VL3 154 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 GRAMD2BQ96HH9 432 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 M0R2Z0 102 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 CSN3P07498 182 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 ESDP10768 282 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 GP9P14770 177 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 ATP5IP56385 69 aaPredicted RBP10.71□□□□□ -0.69
CLK3-215ENST00000564353 UNQ5815/PRO19632Q6UWF5 114 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 MBD6Q96DN6 1003 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 NGBQ9NPG2 151 aa10.71□□□□□ -0.69
CLK3-215ENST00000564353 PRRX1P54821 245 aa10.71□□□□□ -0.7
CLK3-215ENST00000564353 ZNF672Q499Z4 452 aaPredicted RBP10.71□□□□□ -0.7
CLK3-215ENST00000564353 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.7
CLK3-215ENST00000564353 ORAOV1Q8WV07 137 aa10.71□□□□□ -0.7
CLK3-215ENST00000564353 BORCS7Q96B45 105 aa10.71□□□□□ -0.7
CLK3-215ENST00000564353 HIGD1AQ9Y241 93 aa10.71□□□□□ -0.7
CLK3-215ENST00000564353 M0R3E3 92 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 CCL21O00585 134 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 P01737 135 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 TCRAP04437 139 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 MYCNOSP40205 109 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 GPR82Q96P67 336 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 RASL11BQ9BPW5 248 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 C7orf69Q9H7B7 122 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
CLK3-215ENST00000564353 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
CLK3-215ENST00000564353 OR10J3Q5JRS4 329 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 SPATA12Q7Z6I5 190 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 SLC25A39Q9BZJ4 359 aaPredicted RBP10.7□□□□□ -0.7
CLK3-215ENST00000564353 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
CLK3-215ENST00000564353 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 IGLC1P0CG04 106 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 EBLN2Q6P2I7 272 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 TEX45Q8NA69 505 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 DAZAP1Q96EP5 407 aaKnown RBP10.69□□□□□ -0.7
CLK3-215ENST00000564353 B9A039 149 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 CRYGCP07315 174 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 MRPL52Q86TS9 123 aaKnown RBP10.69□□□□□ -0.7
CLK3-215ENST00000564353 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 C8orf46Q8TAG6 207 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 ZNF596Q8TC21 504 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 TXN2Q99757 166 aa10.69□□□□□ -0.7
CLK3-215ENST00000564353 CRYGBP07316 175 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 COL8A1P27658 744 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 SSX8Q7RTT4 187 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 TRGV9Q99603 122 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
CLK3-215ENST00000564353 SERTM2A0A1B0GWG4 89 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 NCBP2LA6PVI3 153 aaKnown RBP10.68□□□□□ -0.7
CLK3-215ENST00000564353 INS-IGF2F8WCM5 200 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 IGKV1-17P01599 117 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 IL4P05112 153 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 Q6ZN92 141 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 OR8B2Q96RD0 313 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
CLK3-215ENST00000564353 NDUFS7O75251 213 aa10.67□□□□□ -0.7
CLK3-215ENST00000564353 FCGR2BP31994 310 aaPredicted RBP10.67□□□□□ -0.7
CLK3-215ENST00000564353 C20orf144Q9BQM9 153 aa10.67□□□□□ -0.7
CLK3-215ENST00000564353 C5orf17Q8NAS9 161 aa10.67□□□□□ -0.7
CLK3-215ENST00000564353 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
CLK3-215ENST00000564353 I3L2K1 104 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms