RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 PRSS3P2Q8NHM4 247 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 ZNF502Q8TBZ5 544 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 PCNPQ8WW12 178 aaKnown RBP6.36□□□□□ -1.39
SMG1-209ENST00000563836 MBD3L1Q8WWY6 194 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 RNF125Q96EQ8 232 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 GRAMD2BQ96HH9 432 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 ELOVL1Q9BW60 279 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 DOK5Q9P104 306 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 RABAC1Q9UI14 185 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 NAV3Q8IVL0 2385 aa6.36□□□□□ -1.39
SMG1-209ENST00000563836 TRAV1-1A0A0B4J248 108 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 A0A1W2PS18 150 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 MFSD2BA6NFX1 497 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 SEC14L6B5MCN3 397 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 GGCTO75223 188 aaKnown RBP6.35□□□□□ -1.39
SMG1-209ENST00000563836 IGHG4P01861 327 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 PSG1P11464 419 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 ZNF90Q03938 601 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 KLK9Q2XQG4 91 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 C19orf35Q6ZS72 473 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 Q71RC1 249 aaPredicted RBP6.35□□□□□ -1.39
SMG1-209ENST00000563836 LINC00305Q7Z4B0 112 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 UHRF2Q96PU4 802 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 METTL26Q96S19 204 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 SMR3AQ99954 134 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 TXNDC17Q9BRA2 123 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 NKX6-2Q9C056 277 aaPredicted RBP6.35□□□□□ -1.39
SMG1-209ENST00000563836 TMEM231Q9H6L2 316 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 VSIRQ9H7M9 311 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 ZNF702PQ9H963 129 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 GNG13Q9P2W3 67 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 PEF1Q9UBV8 284 aaKnown RBP6.35□□□□□ -1.39
SMG1-209ENST00000563836 KLK9Q9UKQ9 250 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 CHTOPQ9Y3Y2 248 aaKnown RBP6.35□□□□□ -1.39
SMG1-209ENST00000563836 S4R3C0 116 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 CCDC168Q8NDH2 2452 aa6.35□□□□□ -1.39
SMG1-209ENST00000563836 A0A1B0GUS0 222 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 RBFOX3A6NFN3 312 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 I3L521 148 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 M0QZ24 198 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 CRLF1O75462 422 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 OR2C1O95371 312 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 S100A9P06702 114 aaKnown RBP6.34□□□□□ -1.39
SMG1-209ENST00000563836 STAG3L2P0CL84 134 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 STAG3L3P0CL85 134 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 ZP3P21754 424 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 GATA2P23769 480 aaPredicted RBP6.34□□□□□ -1.39
SMG1-209ENST00000563836 FHITP49789 147 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 PLP1P60201 277 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 GUK1Q16774 197 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 RPEL1Q2QD12 228 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 ZNF329Q86UD4 541 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 BPIFA4PQ86YQ2 179 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 Q8N2B8 174 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 RPP25LQ8N5L8 163 aaKnown RBP6.34□□□□□ -1.39
SMG1-209ENST00000563836 KLHDC1Q8N7A1 406 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 OR4F17Q8NGA8 305 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 OR5AU1Q8NGC0 362 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 TMEM190Q8WZ59 177 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 UBE2E2Q96LR5 201 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 OR4F4Q96R69 305 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 PAXXQ9BUH6 204 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 VAX2Q9UIW0 290 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMG1-209ENST00000563836 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 FBN2P35556 2912 aa6.34□□□□□ -1.39
SMG1-209ENST00000563836 TACC2O95359 2948 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 IGKV1D-37A0A075B6S9 117 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 IGKV1OR2-108A0A075B7D4 117 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.33□□□□□ -1.4
SMG1-209ENST00000563836 F6UZH7 168 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 NDUFA4O00483 81 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 HMGB3O15347 200 aaKnown RBP6.33□□□□□ -1.4
SMG1-209ENST00000563836 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 IGHV3-11P01762 117 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 RPL7P18124 248 aaKnown RBP6.33□□□□□ -1.4
SMG1-209ENST00000563836 NPPCP23582 126 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 PSMB8P28062 276 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 FGF8P55075 233 aaPredicted RBP6.33□□□□□ -1.4
SMG1-209ENST00000563836 UBE2L3P68036 154 aaKnown RBP6.33□□□□□ -1.4
SMG1-209ENST00000563836 HAGHQ16775 308 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 CST9LP1Q5W188 147 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 Q6ZSV7 163 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 WIPF2Q8TF74 440 aaPredicted RBP6.33□□□□□ -1.4
SMG1-209ENST00000563836 GPR82Q96P67 336 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 C20orf24Q9BUV8 137 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 OR51M1Q9H341 326 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 UFC1Q9Y3C8 167 aa6.33□□□□□ -1.4
SMG1-209ENST00000563836 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 ZNF320A2RRD8 509 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 NDUFA7O95182 113 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 CTSGP08311 255 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 LGALS1P09382 135 aaKnown RBP6.32□□□□□ -1.4
SMG1-209ENST00000563836 ARL14EPLP0DKL9 152 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 BCL2P10415 239 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 GALR1P47211 349 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 MEOX2P50222 304 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms