RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CNBD2Q96M20 576 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 SAV1Q9H4B6 383 aaPredicted RBP6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 IFT46Q9NQC8 304 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 SSR3Q9UNL2 185 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 KIF25-AS1Q9Y6Z4 181 aa6.68□□□□□ -1.34
HDGFL3-204ENST00000563790 OPRK1P41145 380 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 RND2P52198 227 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 AP2S1P53680 142 aaPredicted RBP6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 B2MP61769 119 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 PSG9Q00887 426 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 SPINK6Q6UWN8 80 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 SIGLEC15Q6ZMC9 328 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 SLC35G3Q8N808 338 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 TMEM230Q96A57 120 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 BLOC1S6Q9UL45 172 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 ICOSQ9Y6W8 199 aa6.67□□□□□ -1.34
HDGFL3-204ENST00000563790 TRAV30A0A087WSZ9 112 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 TMEM127O75204 238 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 IL4P05112 153 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 PI3P19957 117 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 OR10J1P30954 320 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 HSPA13P48723 471 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 C2orf83Q53S99 150 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 LPCAT3Q6P1A2 487 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 IZUMO2Q6UXV1 221 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 FOXI2Q6ZQN5 318 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 OR1S2Q8NGQ3 325 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 ABHD1Q96SE0 405 aa6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
HDGFL3-204ENST00000563790 A0A0J9YX75 114 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 F6UB75 175 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 CRXO43186 299 aaPredicted RBP6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 TOMM40O96008 361 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 UCP1P25874 307 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 TNFSF8P32971 234 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 PRSS3P35030 304 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 EIF2B2P49770 351 aaKnown RBP6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 UBE2NLQ5JXB2 153 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 LHFPL5Q8TAF8 219 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 GPR146Q96CH1 333 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 S100A16Q96FQ6 103 aaKnown RBP6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 NARS2Q96I59 477 aaKnown RBP6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 C20orf173Q96LM9 149 aa6.65□□□□□ -1.34
HDGFL3-204ENST00000563790 IGKV1D-37A0A075B6S9 117 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 LOC100506127A0A0U1RQW1 187 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 PSG1P11464 419 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 SLC25A4P12235 298 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 RPS19P39019 145 aaKnown RBP6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 SUB1P53999 127 aaKnown RBP eCLIP6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 SPCS3P61009 180 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 SP6Q3SY56 376 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 FAM78BQ5VT40 261 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 SAMD12Q8N8I0 201 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 Q8N976 141 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 OR52E5Q8NH55 327 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 Q8WTZ3 238 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 NPIPB3Q92617 1050 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 C16orf74Q96GX8 76 aa6.64□□□□□ -1.35
HDGFL3-204ENST00000563790 C3orf85A0A1B0GTC6 90 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 FAM231BA6NCW3 169 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 H7C1H1 209 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 PHOX2AO14813 284 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 HTR2BP41595 481 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 PSMB3P49720 205 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 RORCP51449 518 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 PIGPP57054 158 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 OR51G1Q8NGK1 321 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 RNASEH2CQ8TDP1 164 aaKnown RBP6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 ZNF486Q96H40 463 aaPredicted RBP6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 SCPEP1Q9HB40 452 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 RAB26Q9ULW5 256 aa6.63□□□□□ -1.35
HDGFL3-204ENST00000563790 RNF222A6NCQ9 220 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 CDS2O95674 445 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 RD3LP0DJH9 198 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 RCVRNP35243 200 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 AKR1C2P52895 323 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 TSPAN5P62079 268 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 NMSQ5H8A3 153 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 SPATA31B1PQ5VZV4 182 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 OR4D10Q8NGI6 311 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 GLYATL2Q8WU03 294 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
HDGFL3-204ENST00000563790 ZNF98A6NK75 572 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 ISLRO14498 428 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 GSTZ1O43708 216 aaPredicted RBP6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 S100GP29377 79 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 ZNF90Q03938 601 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 LINC01556Q5JQF7 62 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 OR8G2PQ6IF36 304 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 SLC24A4Q8NFF2 622 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 BAALCQ8WXS3 180 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 LINC00052Q96N35 136 aa6.61□□□□□ -1.35
HDGFL3-204ENST00000563790 TMEM222Q9H0R3 208 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms