RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 NUDT3O95989 172 aa13.07□□□□□ -0.32
NME3-204ENST00000563498 PRM2P04554 102 aa13.07□□□□□ -0.32
NME3-204ENST00000563498 ATP5G1P05496 136 aa13.07□□□□□ -0.32
NME3-204ENST00000563498 ATP5G3P48201 142 aa13.07□□□□□ -0.32
NME3-204ENST00000563498 Q8N1X5 172 aa13.07□□□□□ -0.32
NME3-204ENST00000563498 LINC00588Q9Y4M8 146 aa13.07□□□□□ -0.32
NME3-204ENST00000563498 IL18Q14116 193 aa13.06□□□□□ -0.32
NME3-204ENST00000563498 TMEM256Q8N2U0 113 aa13.06□□□□□ -0.32
NME3-204ENST00000563498 BPIFCQ8NFQ6 507 aa13.06□□□□□ -0.32
NME3-204ENST00000563498 TRAV8-2A0A0B4J237 113 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 SLC25A6P12236 298 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 AZU1P20160 251 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 RPP30P78346 268 aaKnown RBP13.05□□□□□ -0.32
NME3-204ENST00000563498 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
NME3-204ENST00000563498 TMEM147Q9BVK8 224 aa13.05□□□□□ -0.32
NME3-204ENST00000563498 MED6O75586 246 aa13.04□□□□□ -0.32
NME3-204ENST00000563498 IAPPP10997 89 aa13.04□□□□□ -0.32
NME3-204ENST00000563498 ORM2P19652 201 aa13.04□□□□□ -0.32
NME3-204ENST00000563498 DIRAS2Q96HU8 199 aa13.04□□□□□ -0.32
NME3-204ENST00000563498 MCUBQ9NWR8 336 aa13.04□□□□□ -0.32
NME3-204ENST00000563498 PAIP2BQ9ULR5 123 aaKnown RBP13.04□□□□□ -0.32
NME3-204ENST00000563498 TAS2R60P59551 318 aa13.03□□□□□ -0.32
NME3-204ENST00000563498 FCN2Q15485 313 aa13.03□□□□□ -0.32
NME3-204ENST00000563498 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
NME3-204ENST00000563498 TMEM182Q6ZP80 229 aaPredicted RBP13.03□□□□□ -0.32
NME3-204ENST00000563498 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
NME3-204ENST00000563498 RNF141Q8WVD5 230 aa13.03□□□□□ -0.32
NME3-204ENST00000563498 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
NME3-204ENST00000563498 APOBP04114 4563 aaKnown RBP13.02□□□□□ -0.32
NME3-204ENST00000563498 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 GATA2P23769 480 aaPredicted RBP13.02□□□□□ -0.33
NME3-204ENST00000563498 CLINT1Q14677 625 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 SSX7Q7RTT5 188 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 LRTM2Q8N967 370 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 ZNF738Q8NE65 137 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 LINC01587Q99440 93 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 SLC25A39Q9BZJ4 359 aaPredicted RBP13.02□□□□□ -0.33
NME3-204ENST00000563498 Q9H8V8 135 aa13.02□□□□□ -0.33
NME3-204ENST00000563498 RSL24D1Q9UHA3 163 aaKnown RBP13.02□□□□□ -0.33
NME3-204ENST00000563498 TIMM8BQ9Y5J9 83 aaPredicted RBP13.02□□□□□ -0.33
NME3-204ENST00000563498 H3BRN7 92 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 SMIM18P0DKX4 95 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
NME3-204ENST00000563498 TMEM128Q5BJH2 165 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 SPATA12Q7Z6I5 190 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
NME3-204ENST00000563498 SYNGR2O43760 224 aa13□□□□□ -0.33
NME3-204ENST00000563498 AKR1C1Q04828 323 aa13□□□□□ -0.33
NME3-204ENST00000563498 FGL1Q08830 312 aa13□□□□□ -0.33
NME3-204ENST00000563498 SPCS2Q15005 226 aa13□□□□□ -0.33
NME3-204ENST00000563498 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
NME3-204ENST00000563498 ZNF503Q96F45 646 aa13□□□□□ -0.33
NME3-204ENST00000563498 SCRT2Q9NQ03 307 aa13□□□□□ -0.33
NME3-204ENST00000563498 CXCL3P19876 107 aa12.99□□□□□ -0.33
NME3-204ENST00000563498 RHOBP62745 196 aa12.99□□□□□ -0.33
NME3-204ENST00000563498 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
NME3-204ENST00000563498 TMEM144Q7Z5S9 345 aa12.99□□□□□ -0.33
NME3-204ENST00000563498 RNASE8Q8TDE3 154 aaKnown RBP12.99□□□□□ -0.33
NME3-204ENST00000563498 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
NME3-204ENST00000563498 A0A087X0K7 114 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 WRBO00258 174 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 BTF3P20290 206 aaKnown RBP12.98□□□□□ -0.33
NME3-204ENST00000563498 RAP2BP61225 183 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 ACOT7LQ6ZUV0 252 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 TMED4Q7Z7H5 227 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
NME3-204ENST00000563498 Q9H3A6 140 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
NME3-204ENST00000563498 HIGD1AQ9Y241 93 aa12.98□□□□□ -0.33
NME3-204ENST00000563498 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 HYPMO75409 117 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 IL5P05113 134 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 HTN1P15515 57 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 VAMP1P23763 118 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 FAUP35544 74 aaKnown RBP12.97□□□□□ -0.33
NME3-204ENST00000563498 CDKN1BP46527 198 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 PLP1P60201 277 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 PSG3Q16557 428 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 CYP2G1PQ6ZSU1 146 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 GNPNAT1Q96EK6 184 aaPredicted RBP12.97□□□□□ -0.33
NME3-204ENST00000563498 UPK3BQ9BT76 320 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 KRTAP1-5Q9BYS1 174 aa12.97□□□□□ -0.33
NME3-204ENST00000563498 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
NME3-204ENST00000563498 STRAPQ9Y3F4 350 aaKnown RBP12.97□□□□□ -0.33
NME3-204ENST00000563498 H7BYZ3 331 aa12.96□□□□□ -0.33
NME3-204ENST00000563498 M6PRP20645 277 aa12.96□□□□□ -0.33
NME3-204ENST00000563498 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
NME3-204ENST00000563498 RXFP4Q8TDU9 374 aa12.96□□□□□ -0.33
NME3-204ENST00000563498 SOSTQ9BQB4 213 aa12.96□□□□□ -0.33
NME3-204ENST00000563498 C20orf144Q9BQM9 153 aa12.96□□□□□ -0.33
NME3-204ENST00000563498 TRAV26-1A0A087WT03 109 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms