RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PITX3O75364 302 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 NUDT3O95989 172 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 PRM2P04554 102 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
SF3B3-202ENST00000562722 ALDH3B2P48448 385 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 FAM3BP58499 235 aaPredicted RBP9.17□□□□□ -0.94
SF3B3-202ENST00000562722 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 BAP18Q8IXM2 172 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 ZNF738Q8NE65 137 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 OR11H7Q8NGC8 314 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 PPP1R14DQ9NXH3 145 aa9.17□□□□□ -0.94
SF3B3-202ENST00000562722 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 H3BP45 60 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 SYNGR2O43760 224 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 NOL3O60936 208 aaKnown RBP9.16□□□□□ -0.94
SF3B3-202ENST00000562722 TMEM128Q5BJH2 165 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 SPANXN5Q5MJ07 72 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 OR4D5Q8NGN0 318 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 DYNC2LI1Q8TCX1 351 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 RAB2BQ8WUD1 216 aa9.16□□□□□ -0.94
SF3B3-202ENST00000562722 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 A8MTW9 85 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 HOXB5P09067 269 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 SLC25A6P12236 298 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 HTN1P15515 57 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 AP3S2P59780 193 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 RAP2BP61225 183 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 B2MP61769 119 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 RHOBP62745 196 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 HIST1H1AQ02539 215 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-202ENST00000562722 TMEM182Q6ZP80 229 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-202ENST00000562722 ACOT7LQ6ZUV0 252 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 LINC01587Q99440 93 aa9.15□□□□□ -0.94
SF3B3-202ENST00000562722 SLC25A39Q9BZJ4 359 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-202ENST00000562722 STRAPQ9Y3F4 350 aaKnown RBP9.15□□□□□ -0.94
SF3B3-202ENST00000562722 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 BOLA2-SMG1P6H3BVE0 249 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 CRXO43186 299 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-202ENST00000562722 IL5P05113 134 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 TNFSF8P32971 234 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 CCL18P55774 89 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 TNP2Q05952 138 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 FCN2Q15485 313 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 PYDC2Q56P42 97 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 TOMM5Q8N4H5 51 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 LRRC20Q8TCA0 184 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 C17orf77Q96MU5 243 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 HIGD1AQ9Y241 93 aa9.14□□□□□ -0.95
SF3B3-202ENST00000562722 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 PRSS46E5RG02 174 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 SFT2D2O95562 160 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 ATP5G1P05496 136 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 OR5G3P0C626 314 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 RPL7P18124 248 aaKnown RBP9.13□□□□□ -0.95
SF3B3-202ENST00000562722 AZU1P20160 251 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 ATP5G3P48201 142 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 TMBIM6P55061 237 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 PPP1R1AQ13522 171 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 CLINT1Q14677 625 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 CYP2G1PQ6ZSU1 146 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 C6orf223Q8N319 242 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 MCFD2Q8NI22 146 aa9.13□□□□□ -0.95
SF3B3-202ENST00000562722 H3BRN7 92 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 HYPMO75409 117 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 PRB4P10163 310 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-202ENST00000562722 TSPOP30536 169 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 OR8A1Q8NGG7 326 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 ZNRF2Q8NHG8 242 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 BCL7BQ9BQE9 202 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 SLC25A21Q9BQT8 299 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-202ENST00000562722 SHANK2-AS3Q9BTD1 123 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 SLIRPQ9GZT3 109 aaKnown RBP9.12□□□□□ -0.95
SF3B3-202ENST00000562722 NACAE9PAV3 2078 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 MUC4Q99102 2169 aa9.12□□□□□ -0.95
SF3B3-202ENST00000562722 CBY3A6NI87 242 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 LINC00869P0C866 280 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 TAS2R60P59551 318 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 TMEM144Q7Z5S9 345 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 S100A7AQ86SG5 101 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 TMEM256Q8N2U0 113 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 C16orf74Q96GX8 76 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 UHRF2Q96PU4 802 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 SOSTQ9BQB4 213 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 PSENENQ9NZ42 101 aa9.11□□□□□ -0.95
SF3B3-202ENST00000562722 HSPG2P98160 4391 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 SSSCA1O60232 199 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 CXCL3P19876 107 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 ANXA7P20073 488 aaKnown RBP9.1□□□□□ -0.95
SF3B3-202ENST00000562722 RRAS2P62070 204 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-202ENST00000562722 POLR2GP62487 172 aaKnown RBP eCLIP9.1□□□□□ -0.95
SF3B3-202ENST00000562722 PSG3Q16557 428 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 TRIM63Q969Q1 353 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
SF3B3-202ENST00000562722 TIMM8BQ9Y5J9 83 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms