RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 H3BMG7 143 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 IGFL3Q6UXB1 125 aa11.28□□□□□ -0.6
GTF3C1-203ENST00000562609 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 PROP1O75360 226 aa11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 FAM27E3Q08E93 113 aa11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 SLC25A2Q9BXI2 301 aa11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 ENY2Q9NPA8 101 aa11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 TPRP12270 2363 aaKnown RBP11.27□□□□□ -0.6
GTF3C1-203ENST00000562609 TRGV8A0A0C4DH27 118 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 CACNG7P62955 275 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 C20orf78Q9BR46 151 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 P01737 135 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 ZNF146Q15072 292 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 OR11H2Q8NH07 326 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 RNF183Q96D59 192 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 NCOR2Q9Y618 2525 aa11.27□□□□□ -0.61
GTF3C1-203ENST00000562609 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 MYOD1P15172 320 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 Q8IYB0 196 aa11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 C1orf162Q8NEQ5 155 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-203ENST00000562609 LRBAP50851 2863 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 K7EMI3 77 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 MLANAQ16655 118 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 FAM201AQ5SY85 155 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
GTF3C1-203ENST00000562609 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 SLC25A17O43808 307 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 IGHV3-13P01766 116 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 LOXL1Q08397 574 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 EDDM3AQ14507 147 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 COQ2Q96H96 371 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 PAXXQ9BUH6 204 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 SCNM1Q9BWG6 230 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 RPL39P5Q59GN2 51 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 OR13A1Q8NGR1 328 aa11.24□□□□□ -0.61
GTF3C1-203ENST00000562609 A0A096LNJ9 63 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 SPRY3O43610 288 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 MOSP00540 346 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 HSPE1P61604 102 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 GPR82Q96P67 336 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 COL6A6A6NMZ7 2263 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 E9PLD3 99 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 LTAP01374 205 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 GAGE13Q4V321 117 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 PRR30Q53SZ7 412 aaPredicted RBP11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 TTC9CQ8N5M4 171 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 SYT8Q8NBV8 401 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 S1PR3Q99500 378 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 CYSLTR1Q9Y271 337 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 TACC2O95359 2948 aa11.23□□□□□ -0.61
GTF3C1-203ENST00000562609 TCRBV4S1A1TA0A5B7 111 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 MT-ATP8P03928 68 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 SLC25A5P05141 298 aaKnown RBP11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 IFI27P40305 119 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 FXYD7P58549 80 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 TTTY13Q9BZ97 58 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 ERG28Q9UKR5 140 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 DSCAMO60469 2012 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 CT83Q5H943 113 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 CD177Q8N6Q3 437 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 EPDR1Q9UM22 224 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 LOC389332A0A1B0GUA5 103 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 IGLL5B9A064 214 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 NPIPB6E9PJ23 425 aa11.22□□□□□ -0.61
GTF3C1-203ENST00000562609 ZNF414Q96IQ9 312 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms