RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 MYOFQ9NZM1 2061 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 SUPT4H1P63272 117 aaKnown RBP9.16□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 LY6G6FQ5SQ64 297 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 KIF13BQ9NQT8 1826 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 LURAP1LQ8IV03 231 aa9.16□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE12JA6NER3 117 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 PRTN3P24158 256 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE1Q13065 139 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE4Q13068 117 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 GAGE5Q13069 117 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 SPXQ9BT56 116 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 F8VVB4 439 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 F8VWA3 439 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.94
RPAP1-204ENST00000562303 ZNF362Q5T0B9 420 aaPredicted RBP9.15□□□□□ -0.94
RPAP1-204ENST00000562303 AGMATQ9BSE5 352 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 ZDBF2Q9HCK1 2354 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 IGKV1D-17A0A075B6S4 117 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 KNCNA6PVL3 124 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 OVOL2Q9BRP0 275 aa9.15□□□□□ -0.94
RPAP1-204ENST00000562303 DKK1O94907 266 aa9.15□□□□□ -0.95
RPAP1-204ENST00000562303 MPZP25189 248 aa9.15□□□□□ -0.95
RPAP1-204ENST00000562303 FAM90A2PQ658T7 463 aa9.15□□□□□ -0.95
RPAP1-204ENST00000562303 LY6G5BQ8NDX9 201 aa9.15□□□□□ -0.95
RPAP1-204ENST00000562303 COL5A3P25940 1745 aaPredicted RBP9.14□□□□□ -0.95
RPAP1-204ENST00000562303 LIME1Q9H400 295 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 GSN-AS1Q9NRJ2 163 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 CACNA1IQ9P0X4 2223 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 NKAPP1Q8N9T2 125 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 ANKRD36A6QL64 1941 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 AMBPP02760 352 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 BTCP35070 178 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 TMEM158Q8WZ71 300 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
RPAP1-204ENST00000562303 DNAJC30Q96LL9 226 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 PARP14Q460N5 1801 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 A6NNC1 897 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 LINC00473A8K010 186 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 IGHG3P01860 377 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 ATRAIDQ6UW56 229 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 C2orf82Q6UX34 121 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 LYPD1Q8N2G4 141 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 SNHG12Q9BXW3 62 aa9.14□□□□□ -0.95
RPAP1-204ENST00000562303 K7ENP7 123 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 IGKV1-5P01602 117 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 CR1LQ2VPA4 569 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 LHBP01229 141 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 APOC4P55056 127 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 ZNF114Q8NC26 417 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 SCN10AQ9Y5Y9 1956 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 TRAV8-3A0A0A6YYJ7 113 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 HOXD3P31249 432 aaPredicted RBP9.13□□□□□ -0.95
RPAP1-204ENST00000562303 UBE2E1P51965 193 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
RPAP1-204ENST00000562303 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
RPAP1-204ENST00000562303 TRAV8-1A0A0A6YYK1 113 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 IGHV1-69DA0A0B4J2H0 117 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 ATP6V0E1O15342 81 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 IGHV1-69P01742 117 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 GFI1Q99684 422 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 TUBGCP6Q96RT7 1819 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 HGFACQ04756 655 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 IL17RELQ6ZVW7 336 aa9.13□□□□□ -0.95
RPAP1-204ENST00000562303 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
RPAP1-204ENST00000562303 RALGAPA1Q6GYQ0 2036 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 Q6P435 159 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 C17orf82Q86X59 251 aaPredicted RBP9.12□□□□□ -0.95
RPAP1-204ENST00000562303 J3QRE1 110 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 NTF4P34130 210 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 MST1LQ2TV78 715 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
RPAP1-204ENST00000562303 RPRMLQ8N4K4 120 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 SUMO4Q6EEV6 95 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 AKAP6Q13023 2319 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 ESDP10768 282 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 GUSBP1Q15486 140 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
RPAP1-204ENST00000562303 ARMS2P0C7Q2 107 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 LINC00205P59089 165 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 LRRC37AA6NMS7 1700 aa9.11□□□□□ -0.95
RPAP1-204ENST00000562303 C1orf122Q6ZSJ8 110 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms