RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 NHLRC4P0CG21 123 aaPredicted RBP9.93□□□□□ -0.82
CDH1-204ENST00000562118 RPL7P18124 248 aaKnown RBP9.93□□□□□ -0.82
CDH1-204ENST00000562118 ZNF345Q14585 488 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 DEFB121Q5J5C9 76 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 LINC00305Q7Z4B0 112 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 SBSPONQ8IVN8 264 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 OR8I2Q8N0Y5 310 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 GBGT1Q8N5D6 347 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 SRD5A3Q9H8P0 318 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
CDH1-204ENST00000562118 HMSDA8MTL9 139 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 DNASE2O00115 360 aaPredicted RBP9.92□□□□□ -0.82
CDH1-204ENST00000562118 GALR1P47211 349 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 PSMB3P49720 205 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 MEOX2P50222 304 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 ZNF266Q14584 549 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 C10orf113Q5VZT2 155 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 Q6ZRG5 221 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 TCTE3Q8IZS6 198 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 OR11H4Q8NGC9 324 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 UBQLN2Q9UHD9 624 aa9.92□□□□□ -0.82
CDH1-204ENST00000562118 IGKV3-7A0A075B6H7 116 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 ISLRO14498 428 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 COX7A2P2O60397 106 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 IGLC2P0DOY2 106 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 CXCL2P19875 107 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 TFPI2P48307 235 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
CDH1-204ENST00000562118 HAGHQ16775 308 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 LEMD1Q68G75 181 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 INO80EQ8NBZ0 244 aaPredicted RBP9.91□□□□□ -0.82
CDH1-204ENST00000562118 OR2G3Q8NGZ4 309 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 PPP1R14BQ96C90 147 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 RSG1Q9BU20 258 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 SMIM3Q9BZL3 60 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 TMEM14CQ9P0S9 112 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 AGRNO00468 2067 aa9.91□□□□□ -0.82
CDH1-204ENST00000562118 FXYD6-FXYD2A0A087WZ82 144 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 TRAV8-2A0A0B4J237 113 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 KIR2DL5BA0A0G2JN68 375 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 KIR2DL5BA0A0G2JPC4 375 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 A8MTW9 85 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 C17orf112F2Z3M2 114 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 IFNA5P01569 189 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 DEFB131AP59861 70 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 ZNF124Q15973 351 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 GCSAMLQ5JQS6 135 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 APRG1Q8IVJ8 170 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 KIR2DL5AQ8N109 375 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 KIR2DL5BQ8NHK3 375 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 FAM167A-AS1Q96KT0 104 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 CLUHP3Q96NS8 147 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 PSMG3Q9BT73 122 aaPredicted RBP9.9□□□□□ -0.82
CDH1-204ENST00000562118 SLC25A22Q9H936 323 aa9.9□□□□□ -0.82
CDH1-204ENST00000562118 SMLR1H3BR10 107 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
CDH1-204ENST00000562118 TRPT1Q86TN4 253 aaKnown RBP9.89□□□□□ -0.83
CDH1-204ENST00000562118 BPIFA4PQ86YQ2 179 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 WFDC3Q8IUB2 231 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 SAT2Q96F10 170 aaPredicted RBP9.89□□□□□ -0.83
CDH1-204ENST00000562118 MRPL32Q9BYC8 188 aaKnown RBP9.89□□□□□ -0.83
CDH1-204ENST00000562118 HRH4Q9H3N8 390 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 TUBA4BQ9H853 241 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 CYTL1Q9NRR1 136 aa9.89□□□□□ -0.83
CDH1-204ENST00000562118 LOC102724200A0A096LPH7 203 aaPredicted RBP9.88□□□□□ -0.83
CDH1-204ENST00000562118 TAAR5O14804 337 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 ZNF253O75346 499 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 KCNRGQ8N5I3 272 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 ZNF709Q8N972 641 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 SCGB1C1Q8TD33 95 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 C20orf173Q96LM9 149 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 SLC25A2Q9BXI2 301 aa9.88□□□□□ -0.83
CDH1-204ENST00000562118 TRAV5A0A0B4J249 113 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 ARPC5O15511 151 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 HLA-DRB4P13762 266 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 PSMG4Q5JS54 123 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 RPL7L1Q6DKI1 246 aaKnown RBP9.87□□□□□ -0.83
CDH1-204ENST00000562118 LCN15Q6UWW0 184 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 MFFQ9GZY8 342 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 ZNF331Q9NQX6 463 aaPredicted RBP9.87□□□□□ -0.83
CDH1-204ENST00000562118 FUT9Q9Y231 359 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 RFNGQ9Y644 331 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 HLA-DRB4X5D2U9 266 aa9.87□□□□□ -0.83
CDH1-204ENST00000562118 H3BMM0 161 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 H3BQ15 152 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 UBE2CO00762 179 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 GIG44P09565 113 aaPredicted RBP9.86□□□□□ -0.83
CDH1-204ENST00000562118 ATF4P18848 351 aaPredicted RBP9.86□□□□□ -0.83
CDH1-204ENST00000562118 M6PRP20645 277 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 ATP6V0CP27449 155 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 ID1P41134 155 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 SERF2P84101 59 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 PDE6HQ13956 83 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 GUK1Q16774 197 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 FFAR4Q5NUL3 377 aa9.86□□□□□ -0.83
CDH1-204ENST00000562118 FAM78BQ5VT40 261 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms