RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ZNF705DP0CH99 300 aaPredicted RBP7.39□□□□□ -1.23
CLK3-205ENST00000561673 ZNF705BP0CI00 300 aaPredicted RBP7.39□□□□□ -1.23
CLK3-205ENST00000561673 MEOX2P50222 304 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 RRAS2P62070 204 aaPredicted RBP7.39□□□□□ -1.23
CLK3-205ENST00000561673 PSG9Q00887 426 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 IAH1Q2TAA2 248 aaPredicted RBP7.39□□□□□ -1.23
CLK3-205ENST00000561673 FAM78BQ5VT40 261 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 SPATA31B1PQ5VZV4 182 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 EBLN2Q6P2I7 272 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 CYP2G1PQ6ZSU1 146 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 MITD1Q8WV92 249 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 NEU1Q99519 415 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 TMEM147Q9BVK8 224 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 SLC35B3Q9H1N7 401 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 RPRMQ9NS64 109 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 GSKIPQ9P0R6 139 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 FAT2Q9NYQ8 4349 aa7.39□□□□□ -1.23
CLK3-205ENST00000561673 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 SMIM9A6NGZ8 99 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 METTL15P1P0C7V9 234 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 CNPY1Q3B7I2 92 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 IGFL4Q6B9Z1 124 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 ZBTB8BQ8NAP8 495 aaPredicted RBP7.38□□□□□ -1.23
CLK3-205ENST00000561673 GPR82Q96P67 336 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 SCRT1Q9BWW7 348 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 SLC25A39Q9BZJ4 359 aaPredicted RBP7.38□□□□□ -1.23
CLK3-205ENST00000561673 DOK5Q9P104 306 aa7.38□□□□□ -1.23
CLK3-205ENST00000561673 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 IGHV4-4A0A075B6R2 117 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 DEFB131BA0A096LNP1 70 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 TRAV8-2A0A0B4J237 113 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 H3BRN7 92 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 LYRM1O43325 122 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 HYPMO75409 117 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 MBPP02686 304 aaPredicted RBP7.37□□□□□ -1.23
CLK3-205ENST00000561673 S100A7P31151 101 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 EMP1P54849 157 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 TAS2R30P59541 319 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 PLP1P60201 277 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 DLK1P80370 383 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 ARL16Q0P5N6 197 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 OR10P1Q8NGE3 313 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 SHANK2-AS3Q9BTD1 123 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 C20orf85Q9H1P6 137 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 NPVFQ9HCQ7 196 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 NDUFA13Q9P0J0 144 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 HIGD1AQ9Y241 93 aa7.37□□□□□ -1.23
CLK3-205ENST00000561673 RCL1Q9Y2P8 373 aaKnown RBP7.37□□□□□ -1.23
CLK3-205ENST00000561673 C7orf66A4D0T2 115 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 TMEM189A5PLL7 270 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 A8MTW9 85 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 FNDC10F2Z333 226 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 TSC22D2O75157 780 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 TCRBP04435 133 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 OR5G3P0C626 314 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 LINC00869P0C866 280 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 SPART-AS1P0CW21 52 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 RAP2BP61225 183 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 SELENOTP62341 195 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 FGL1Q08830 312 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 TEPPQ6URK8 271 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 AMTNQ6UX39 209 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 PATE2Q6UY27 113 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 C1orf158Q8N1D5 194 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 UHRF2Q96PU4 802 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 RNF126Q9BV68 326 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 RFNGQ9Y644 331 aa7.36□□□□□ -1.23
CLK3-205ENST00000561673 TRAV6A0A075B6T7 132 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 K7EPK0 472 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 CCSO14618 274 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 RPL7P18124 248 aaKnown RBP7.35□□□□□ -1.23
CLK3-205ENST00000561673 CNN1P51911 297 aaKnown RBP7.35□□□□□ -1.23
CLK3-205ENST00000561673 SLC38A11Q08AI6 406 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 ARL6Q9H0F7 186 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 MGAT4CQ9UBM8 478 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 DKK2Q9UBU2 259 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 GOLT1BQ9Y3E0 138 aa7.35□□□□□ -1.23
CLK3-205ENST00000561673 FAM25EA8MYX2 175 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 EIF4EBP3O60516 100 aaPredicted RBP7.34□□□□□ -1.23
CLK3-205ENST00000561673 DUSP14O95147 198 aaKnown RBP7.34□□□□□ -1.23
CLK3-205ENST00000561673 AMBPP02760 352 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 PRM2P04554 102 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 FAM222AQ5U5X8 452 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 OR11H7Q8NGC8 314 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 ZNF431Q8TF32 576 aaPredicted RBP7.34□□□□□ -1.23
CLK3-205ENST00000561673 SEC22CQ9BRL7 303 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 GGACTQ9BVM4 153 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 ARV1Q9H2C2 271 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 NUDT15Q9NV35 164 aa7.34□□□□□ -1.23
CLK3-205ENST00000561673 hCG_2014768A0A024R1R8 64 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 A0A087X0K7 114 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 LOC102723971A0A1B0GUV8 181 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 M0R2Z0 102 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 GOSR2O14653 212 aa7.33□□□□□ -1.24
CLK3-205ENST00000561673 AGPAT2O15120 278 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms