RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 UBBP0CG47 229 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 C8orf88P0DMB2 117 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 HIST1H1BP16401 226 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 ZNF93P35789 620 aaPredicted RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 OPRK1P41145 380 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 BCAP31P51572 246 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 LINC00315P59091 139 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 IFITM3Q01628 133 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 ATP5G2Q06055 141 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 FXYD3Q14802 87 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 SYT6Q5T7P8 510 aaPredicted RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 Q5W150 140 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 THOC7Q6I9Y2 204 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 LAMTOR1Q6IAA8 161 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 DEFB107AQ8IZN7 70 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 TMEM256Q8N2U0 113 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 RPP25LQ8N5L8 163 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 TTC9CQ8N5M4 171 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 LFNGQ8NES3 379 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 OR13C9Q8NGT0 318 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 OR5AK2Q8NH90 309 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 DYNLRB2Q8TF09 96 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 TNFAIP8L1Q8WVP5 186 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 ISOC2Q96AB3 205 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 ADTRPQ96IZ2 230 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 Q96MT0 163 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 GPER1Q99527 375 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 UQCC2Q9BRT2 126 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 ALX4Q9H161 411 aaPredicted RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 TAF9BQ9HBM6 251 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 RHBDL2Q9NX52 303 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 METTL1Q9UBP6 276 aaKnown RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 CKLFQ9UBR5 152 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 GNG8Q9UK08 70 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
HERC1-215ENST00000561436 V9GYY5 206 aaPredicted RBP2.23□□□□□ -2.05
HERC1-215ENST00000561436 TENM2Q9NT68 2774 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 IRGMA1A4Y4 181 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 OR4C46A6NHA9 309 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 C2orf70A6NJV1 201 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 NDUFC2-KCTD14E9PQ53 114 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 G3V2T6 193 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 GEMIN2O14893 280 aaKnown RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 SOCS1O15524 211 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 CYB5BO43169 146 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 PDCD6O75340 191 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 CA2P00918 260 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 IGHV3-11P01762 117 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 SAA2P0DJI9 122 aaPredicted RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 P0DMU3 169 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 FAM231AP0DMU4 169 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 FAM231CP0DMU5 169 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 PMCHP20382 165 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 CBLN1P23435 193 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 UBE2KP61086 200 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 SNRPGP62308 76 aaKnown RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 RBMY1FQ15415 496 aaKnown RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 HMGN3Q15651 99 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 LTC4SQ16873 150 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 PIGYQ3MUY2 71 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 HSP90B2PQ58FF3 399 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 YIF1BQ5BJH7 314 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 KDM4DQ6B0I6 523 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 ZFP1Q6P2D0 407 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 RPL22L1Q6P5R6 122 aaKnown RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 DEFB125Q8N687 156 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 OR10W1Q8NGF6 305 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 OR5D18Q8NGL1 313 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 VSTM2AQ8TAG5 236 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 SCGB3A2Q96PL1 93 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 AGMATQ9BSE5 352 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 MRPL20Q9BYC9 149 aaKnown RBP2.22□□□□□ -2.05
HERC1-215ENST00000561436 GABARAPL1Q9H0R8 117 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 FBXL15Q9H469 300 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 ZNF257Q9Y2Q1 563 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 ARL2BPQ9Y2Y0 163 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 UFC1Q9Y3C8 167 aa2.22□□□□□ -2.05
HERC1-215ENST00000561436 SMIM26A0A096LP01 95 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 TRAV2A0A0B4J234 112 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 TCRBV3S1A0A5B6 114 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 KRBOX1C9JBD0 128 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 H7C2Y5 167 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 SIVA1O15304 175 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 MRPS14O60783 128 aaKnown RBP2.21□□□□□ -2.06
HERC1-215ENST00000561436 IGHV3-7P01780 117 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 MAS1P04201 325 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 CRYGCP07315 174 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 CD7P09564 240 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 LINC00869P0C866 280 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 DAPP51397 102 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 TAS2R31P59538 309 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 RHOGP84095 191 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 MED21Q13503 144 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 PRSS8Q16651 343 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 RTL8BQ17RB0 113 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 VMA21Q3ZAQ7 101 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 GCSAMLQ5JQS6 135 aa2.21□□□□□ -2.06
HERC1-215ENST00000561436 TMEM236Q5W0B7 351 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms