RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 LIN7CQ9NUP9 197 aaKnown RBP9.25□□□□□ -0.93
HERC1-214ENST00000561400 DNAJC9-AS1A6NH13 148 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 SRRM4A7MD48 611 aaKnown RBP9.25□□□□□ -0.93
HERC1-214ENST00000561400 IGHG4P01861 327 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 GNG4P50150 75 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 CYCSP99999 105 aaKnown RBP9.25□□□□□ -0.93
HERC1-214ENST00000561400 PPP1R1AQ13522 171 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 SGPP2Q8IWX5 399 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 Q8N976 141 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 OR4C13Q8NGP0 309 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 FLYWCH2Q96CP2 140 aaKnown RBP9.25□□□□□ -0.93
HERC1-214ENST00000561400 RNF125Q96EQ8 232 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 PRR13Q9NZ81 148 aa9.25□□□□□ -0.93
HERC1-214ENST00000561400 H0YIZ8 118 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 JTBO76095 146 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 PFN1P07737 140 aaKnown RBP9.24□□□□□ -0.93
HERC1-214ENST00000561400 ATP6V0CP27449 155 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 HILS1P60008 231 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 OR4A5Q8NH83 315 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 RARRES2Q99969 163 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 RBFOX3A6NFN3 312 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 CHST1O43916 411 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 NUPR1O60356 82 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 IGKV1-39P01597 117 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 IGKV1D-39P04432 117 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 KIR2DS2P43631 304 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 TAS2R31P59538 309 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 RPS16P62249 146 aaKnown RBP9.24□□□□□ -0.93
HERC1-214ENST00000561400 VKORC1L1Q8N0U8 176 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 SMIM3Q9BZL3 60 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 TMEM222Q9H0R3 208 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 PARLQ9H300 379 aa9.24□□□□□ -0.93
HERC1-214ENST00000561400 J3QR89 54 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 IFNA1P01562 189 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 IGLV2-23P01705 113 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 TMEM187Q14656 261 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 FA2HQ7L5A8 372 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 TMEM86BQ8N661 226 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 OSR1Q8TAX0 266 aaPredicted RBP9.23□□□□□ -0.93
HERC1-214ENST00000561400 HSPB9Q9BQS6 159 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 SLC25A33Q9BSK2 321 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 PSMB11A5LHX3 300 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 TMEM50AO95807 157 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 HLA-AP01891 365 aaKnown RBP9.23□□□□□ -0.93
HERC1-214ENST00000561400 HSPB1P04792 205 aaKnown RBP9.23□□□□□ -0.93
HERC1-214ENST00000561400 SERPINE2P07093 398 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 RNF5Q99942 180 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 SERTAD4Q9NUC0 356 aa9.23□□□□□ -0.93
HERC1-214ENST00000561400 C2CD3Q4AC94 2353 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 DIRC3C9JPN6 131 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 SFT2D2O95562 160 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 AMY1AP04745 511 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 YPEL3P61236 119 aaPredicted RBP9.22□□□□□ -0.93
HERC1-214ENST00000561400 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
HERC1-214ENST00000561400 ACSM6Q6P461 480 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 Q8N9W7 124 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 NPBQ8NG41 125 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 OR5AU1Q8NGC0 362 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 OR10G4Q8NGN3 311 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 BTF3L4Q96K17 158 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
HERC1-214ENST00000561400 NCBP2LA6PVI3 153 aaKnown RBP9.21□□□□□ -0.93
HERC1-214ENST00000561400 K7EP34 96 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 NBR2O15453 112 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 GPR137BO60478 399 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 NDUFA3O95167 84 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 KRASP01116 189 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 PSG5Q15238 335 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 POU2AF1Q16633 256 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 LIAT1Q6ZQX7 453 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 C1QTNF4Q9BXJ3 329 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 FBXL15Q9H469 300 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 TPSG1Q9NRR2 321 aa9.21□□□□□ -0.93
HERC1-214ENST00000561400 TET2Q6N021 2002 aaPredicted RBP9.21□□□□□ -0.93
HERC1-214ENST00000561400 C13orf42A0A1B0GVH6 325 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 NPIPB5A8MRT5 1133 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 RRHO14718 337 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 TYMSP04818 313 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 SAA1P0DJI8 122 aaPredicted RBP9.21□□□□□ -0.94
HERC1-214ENST00000561400 G6PCP35575 357 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 C5orf56Q8N8D9 126 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 MOB4Q9Y3A3 225 aa9.21□□□□□ -0.94
HERC1-214ENST00000561400 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
HERC1-214ENST00000561400 SH2D7A6NKC9 451 aaPredicted RBP9.2□□□□□ -0.94
HERC1-214ENST00000561400 HRASP01112 189 aa9.2□□□□□ -0.94
HERC1-214ENST00000561400 IGKV1-5P01602 117 aa9.2□□□□□ -0.94
HERC1-214ENST00000561400 CRYGBP07316 175 aa9.2□□□□□ -0.94
HERC1-214ENST00000561400 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
HERC1-214ENST00000561400 OR5A1Q8NGJ0 315 aa9.2□□□□□ -0.94
HERC1-214ENST00000561400 TAF15Q92804 592 aaKnown RBP eCLIP9.2□□□□□ -0.94
HERC1-214ENST00000561400 GRAMD2BQ96HH9 432 aa9.2□□□□□ -0.94
HERC1-214ENST00000561400 JMJD8Q96S16 334 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 308 ms