RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 APOA2P02652 100 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 MT-ND4LP03901 98 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 IGKV1D-39P04432 117 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 SFTA3P0C7M3 94 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 METTL15P1P0C7V9 234 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CD1BP29016 333 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 SSTR5P35346 364 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 G6PCP35575 357 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CHRNA7P36544 502 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 GPX4P36969 197 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 MYCNOSP40205 109 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 VDAC2P45880 294 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 LGALS7P47929 136 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CEBPDP49716 269 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 PSMB3P49720 205 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 DLX1P56177 255 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 RPL30P62888 115 aaKnown RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 BLCAPP62952 87 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 DLK1P80370 383 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ERHP84090 104 aaKnown RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 SLC38A11Q08AI6 406 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ZNF273Q14593 569 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 C17orf58Q2M2W7 97 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 RNF212Q495C1 297 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CT45A1Q5HYN5 189 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 WDR25Q64LD2 544 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 FAM53AQ6NSI3 398 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 C10orf99Q6UWK7 81 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 TMEM182Q6ZP80 229 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 VMO1Q7Z5L0 202 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 SLC35E3Q7Z769 313 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 MMD2Q8IY49 270 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 LINC00311Q8N616 119 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 C15orf54Q8N8G6 183 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ZNRF1Q8ND25 227 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 OR8B3Q8NGG8 313 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 OR10X1Q8NGY0 326 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 OR5B3Q8NH48 314 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 OR9G1Q8NH87 305 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CT45A3Q8NHU0 189 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ZNF596Q8TC21 504 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CACNG8Q8WXS5 425 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ZNF714Q96N38 554 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 GAFA1Q96PS6 74 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 OR4C12Q96R67 309 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 OR8B2Q96RD0 313 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 CCL13Q99616 98 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 RNF5Q99942 180 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 NIPSNAP3BQ9BS92 247 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 WDR61Q9GZS3 305 aaKnown RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 SIRPDQ9H106 197 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 RBKSQ9H477 322 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 NPVFQ9HCQ7 196 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 DNAJC4Q9NNZ3 241 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 MANBALQ9NQG1 85 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 TMEM242Q9NWH2 141 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 VAX2Q9UIW0 290 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 FOXA2Q9Y261 457 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 AMMECR1Q9Y4X0 333 aaPredicted RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 DNAH2Q9P225 4427 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 HMCN2Q8NDA2 5059 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 PKD1P98161 4303 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 IGHV3OR15-7A0A075B7D8 119 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 A0A087WWC5 75 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CTXND1A0A1B0GTU2 59 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 A0A1W2PPV4 95 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 C15orf61A6NNL5 157 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 C16orf90A8MZG2 172 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 TMEM250H0YL14 139 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 M0R036 132 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 UPK2O00526 184 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 AGPAT2O15120 278 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 PDE6DO43924 150 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CLN5O75503 358 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 KBTBD11O94819 623 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 S1PR2O95136 353 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CYB5R3P00387 301 aaPredicted RBP2.42□□□□□ -2.02
SPG11-225ENST00000561391 GYPAP02724 150 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 IFNA4P05014 189 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 ARG1P05089 322 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CSN3P07498 182 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CFC1BP0CG36 223 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CFC1P0CG37 223 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 IAPPP10997 89 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 FOLR2P14207 255 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 MAS1LP35410 378 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CEACAM3P40198 252 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 OPRK1P41145 380 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 ZNF137PP52743 207 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 RAB5BP61020 215 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 FLI1Q01543 452 aaPredicted RBP2.42□□□□□ -2.02
SPG11-225ENST00000561391 ZNF816Q0VGE8 651 aaPredicted RBP2.42□□□□□ -2.02
SPG11-225ENST00000561391 KLRD1Q13241 179 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 HAGHQ16775 308 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 ZNF506Q5JVG8 444 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 FAM201AQ5SY85 155 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 ETFRF1Q6IPR1 90 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 CEMP1Q6PRD7 247 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms