RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SLC25A31Q9H0C2 315 aa7.47□□□□□ -1.21
HERC1-212ENST00000561348 MED28Q9H204 178 aa7.47□□□□□ -1.21
HERC1-212ENST00000561348 AGRNO00468 2067 aa7.47□□□□□ -1.21
HERC1-212ENST00000561348 DNAH9Q9NYC9 4486 aa7.46□□□□□ -1.21
HERC1-212ENST00000561348 A6NJY4 79 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 UBE2CO00762 179 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 LYL1P12980 280 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 FXYD7P58549 80 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 EWSR1Q01844 656 aaKnown RBP eCLIP7.46□□□□□ -1.22
HERC1-212ENST00000561348 IL15RAQ13261 267 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 OXA1LQ15070 435 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 C1orf194Q5T5A4 169 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 Q6ZRG5 221 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 S100A7AQ86SG5 101 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 OR5C1Q8NGR4 320 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 MUC7Q8TAX7 377 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 OVOL2Q9BRP0 275 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 ARV1Q9H2C2 271 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 C11orf1Q9H5F2 150 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 CLEC5AQ9NY25 188 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 TENM3Q9P273 2699 aa7.46□□□□□ -1.22
HERC1-212ENST00000561348 KIR2DL5BA0A0G2JN68 375 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 KIR2DL5BA0A0G2JPC4 375 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 FNDC10F2Z333 226 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 H0YIZ8 118 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 H3BTX0 84 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 PET100P0DJ07 73 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 C10orf113Q5VZT2 155 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 Q6ZWC4 215 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 LINC00305Q7Z4B0 112 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 RARRES2Q99969 163 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 SLC45A2Q9UMX9 530 aa7.45□□□□□ -1.22
HERC1-212ENST00000561348 IGHV3OR16-12A0A075B7B8 117 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 A0A0J9YWU9 116 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 F6UB75 175 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 H3BRN7 92 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 DEFB4AO15263 64 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 MPC2O95563 127 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 RPL7P18124 248 aaKnown RBP7.44□□□□□ -1.22
HERC1-212ENST00000561348 CXCL3P19876 107 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 PMS2P11Q13670 270 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 FCN2Q15485 313 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 ATP6V1FQ16864 119 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 EBLN2Q6P2I7 272 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 PATE2Q6UY27 113 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 RNF182Q8N6D2 247 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 ZNF709Q8N972 641 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 OR11H2Q8NH07 326 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 MBD2Q9UBB5 411 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 XCL2Q9UBD3 114 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 WDR83OSQ9Y284 106 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 PXMP4Q9Y6I8 212 aa7.44□□□□□ -1.22
HERC1-212ENST00000561348 STAB2Q8WWQ8 2551 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 TRAV5A0A0B4J249 113 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
HERC1-212ENST00000561348 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
HERC1-212ENST00000561348 RPL12P30050 165 aaKnown RBP7.43□□□□□ -1.22
HERC1-212ENST00000561348 PSMB3P49720 205 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 MEOX2P50222 304 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 B2MP61769 119 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 GDF5OSQ5U4N7 250 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 TRPT1Q86TN4 253 aaKnown RBP7.43□□□□□ -1.22
HERC1-212ENST00000561348 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 OR1L4Q8NGR5 311 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 RNF183Q96D59 192 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 GPR82Q96P67 336 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 EDA2RQ9HAV5 297 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 DNAJC4Q9NNZ3 241 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 RPRMQ9NS64 109 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 SLC39A9Q9NUM3 307 aa7.43□□□□□ -1.22
HERC1-212ENST00000561348 CXorf65A6NEN9 183 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 C3orf84H3BNL1 204 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 ISLRO14498 428 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 IFNA5P01569 189 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 HLA-DMBP28068 263 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
HERC1-212ENST00000561348 PXDC1Q5TGL8 231 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 MORN5Q5VZ52 161 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 MORN3Q6PF18 240 aaPredicted RBP7.42□□□□□ -1.22
HERC1-212ENST00000561348 OR11H7Q8NGC8 314 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 SCGB1C1Q8TD33 95 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 TMEM37Q8WXS4 190 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 C20orf173Q96LM9 149 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 RNF126Q9BV68 326 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 PPP1R14DQ9NXH3 145 aa7.42□□□□□ -1.22
HERC1-212ENST00000561348 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
HERC1-212ENST00000561348 H3BMM0 161 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 SPP1P10451 314 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 C4BPBP20851 252 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 RPL29P47914 159 aaKnown RBP7.41□□□□□ -1.22
HERC1-212ENST00000561348 PLP1P60201 277 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 RHOBP62745 196 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 OPCMLQ14982 345 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 GCSAMLQ5JQS6 135 aa7.41□□□□□ -1.22
HERC1-212ENST00000561348 CASC10Q5T4H9 136 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms