RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 MIC13Q5XKP0 118 aa14.63□□□□□ -0.07
TSPAN3-210ENST00000561277 S100A7AQ86SG5 101 aa14.63□□□□□ -0.07
TSPAN3-210ENST00000561277 TRPT1Q86TN4 253 aaKnown RBP14.63□□□□□ -0.07
TSPAN3-210ENST00000561277 GPR82Q96P67 336 aa14.63□□□□□ -0.07
TSPAN3-210ENST00000561277 RNF126Q9BV68 326 aa14.63□□□□□ -0.07
TSPAN3-210ENST00000561277 AGRNO00468 2067 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 PSMB3P49720 205 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 FGL1Q08830 312 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 THAP6Q8TBB0 222 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 RNF183Q96D59 192 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 C16orf92Q96LL3 132 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 MED28Q9H204 178 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 TP53TG1Q9Y2A0 90 aa14.62□□□□□ -0.07
TSPAN3-210ENST00000561277 MEOX2P50222 304 aa14.61□□□□□ -0.07
TSPAN3-210ENST00000561277 DEFB1P60022 68 aa14.61□□□□□ -0.07
TSPAN3-210ENST00000561277 FCN2Q15485 313 aa14.61□□□□□ -0.07
TSPAN3-210ENST00000561277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.61□□□□□ -0.07
TSPAN3-210ENST00000561277 LINC00305Q7Z4B0 112 aa14.61□□□□□ -0.07
TSPAN3-210ENST00000561277 MBD2Q9UBB5 411 aa14.61□□□□□ -0.07
TSPAN3-210ENST00000561277 ISLRO14498 428 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 RPL7P18124 248 aaKnown RBP14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 ATF4P18848 351 aaPredicted RBP14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 PRR20EP86478 221 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 PRR20CP86479 221 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 PRR20DP86480 221 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 PRR20BP86481 221 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 PRR20AP86496 221 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 Q6ZRG5 221 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 OR11H7Q8NGC8 314 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 C17orf77Q96MU5 243 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 DNAH7Q8WXX0 4024 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 B2MP61769 119 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 SAMD13Q5VXD3 122 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 C10orf113Q5VZT2 155 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 TMEM37Q8WXS4 190 aa14.6□□□□□ -0.07
TSPAN3-210ENST00000561277 ELOA3CA0A087WX78 387 aaPredicted RBP14.59□□□□□ -0.07
TSPAN3-210ENST00000561277 RPL29P47914 159 aaKnown RBP14.59□□□□□ -0.07
TSPAN3-210ENST00000561277 OPCMLQ14982 345 aa14.59□□□□□ -0.07
TSPAN3-210ENST00000561277 GDF5OSQ5U4N7 250 aa14.59□□□□□ -0.07
TSPAN3-210ENST00000561277 SLC39A9Q9NUM3 307 aa14.59□□□□□ -0.07
TSPAN3-210ENST00000561277 PXMP4Q9Y6I8 212 aa14.59□□□□□ -0.07
TSPAN3-210ENST00000561277 H3BMM0 161 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 SPP1P10451 314 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 C4BPBP20851 252 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 MORN5Q5VZ52 161 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 C20orf173Q96LM9 149 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 NPCDR1Q9BY65 106 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 RNF24Q9Y225 148 aa14.58□□□□□ -0.08
TSPAN3-210ENST00000561277 C3orf84H3BNL1 204 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 MPDU1O75352 247 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 IGKV3-20P01619 116 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 LYL1P12980 280 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 HLA-DRB4P13762 266 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 RPL12P30050 165 aaKnown RBP14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 IGFL4Q6B9Z1 124 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 MORN3Q6PF18 240 aaPredicted RBP14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 OR1L4Q8NGR5 311 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 DNAJC4Q9NNZ3 241 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 HSPB11Q9Y547 144 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 HLA-DRB4X5D2U9 266 aa14.57□□□□□ -0.08
TSPAN3-210ENST00000561277 A0A0J9YWU9 116 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 F6UB75 175 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 SNRPCP09234 159 aaKnown RBP14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 ZFAND6Q6FIF0 208 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 GATAD1Q8WUU5 269 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 SMIM3Q9BZL3 60 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 SAV1Q9H4B6 383 aaPredicted RBP14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 GIG44P09565 113 aaPredicted RBP14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 OXA1LQ15070 435 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 FOXI2Q6ZQN5 318 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 RNF182Q8N6D2 247 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 CHAC2Q8WUX2 184 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 PFDN5Q99471 154 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 ATP5SQ99766 215 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 RARRES2Q99969 163 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 RPRMQ9NS64 109 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 CLEC5AQ9NY25 188 aa14.56□□□□□ -0.08
TSPAN3-210ENST00000561277 MRPS12O15235 138 aaKnown RBP14.55□□□□□ -0.08
TSPAN3-210ENST00000561277 BPIFA4PQ86YQ2 179 aa14.55□□□□□ -0.08
TSPAN3-210ENST00000561277 OR4B1Q8NGF8 309 aa14.55□□□□□ -0.08
TSPAN3-210ENST00000561277 OR11H2Q8NH07 326 aa14.55□□□□□ -0.08
TSPAN3-210ENST00000561277 LRRC20Q8TCA0 184 aa14.55□□□□□ -0.08
TSPAN3-210ENST00000561277 WDR61Q9GZS3 305 aaKnown RBP14.55□□□□□ -0.08
TSPAN3-210ENST00000561277 A0A087X0K7 114 aa14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 TRAV8-2A0A0B4J237 113 aa14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 TRAV5A0A0B4J249 113 aa14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 NUTF2P61970 127 aaKnown RBP14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 CASC10Q5T4H9 136 aa14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 EBLN2Q6P2I7 272 aa14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 ZNF709Q8N972 641 aa14.54□□□□□ -0.08
TSPAN3-210ENST00000561277 TMEM41BQ5BJD5 291 aa14.53□□□□□ -0.08
TSPAN3-210ENST00000561277 GCSAMLQ5JQS6 135 aa14.53□□□□□ -0.08
TSPAN3-210ENST00000561277 H3BTX0 84 aa14.52□□□□□ -0.08
TSPAN3-210ENST00000561277 HLA-DMBP28068 263 aa14.52□□□□□ -0.08
TSPAN3-210ENST00000561277 FAM78BQ5VT40 261 aa14.52□□□□□ -0.08
TSPAN3-210ENST00000561277 ZNF738Q8NE65 137 aa14.52□□□□□ -0.08
TSPAN3-210ENST00000561277 XCL2Q9UBD3 114 aa14.52□□□□□ -0.08
TSPAN3-210ENST00000561277 A0A0J9YX75 114 aa14.51□□□□□ -0.09
TSPAN3-210ENST00000561277 GIPP09681 153 aaPredicted RBP14.51□□□□□ -0.09
TSPAN3-210ENST00000561277 FXYD7P58549 80 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms