RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CCNKO75909 580 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 IFNA21P01568 189 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 IGHV3-48P01763 117 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 IGHV3-23P01764 117 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 CTSGP08311 255 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 IAPPP10997 89 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 DEFA4P12838 97 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 FCN2Q15485 313 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 KPRPQ5T749 579 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-220ENST00000561253 SLC25A24Q6NUK1 477 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 OR11H7Q8NGC8 314 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 OR4X1Q8NH49 305 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 RNASEH2CQ8TDP1 164 aaKnown RBP4.47□□□□□ -1.69
LRRC28-220ENST00000561253 DCUN1D4Q92564 292 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 SMIM8Q96KF7 97 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 PDCD10Q9BUL8 212 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 RNF126Q9BV68 326 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 NMES1Q9C002 83 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 ZNF436Q9C0F3 470 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-220ENST00000561253 ZNF355PQ9NSJ1 428 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 C21orf62Q9NYP8 219 aa4.47□□□□□ -1.69
LRRC28-220ENST00000561253 PEF1Q9UBV8 284 aaKnown RBP4.47□□□□□ -1.69
LRRC28-220ENST00000561253 TRAV14DV4A0A0A6YYC5 116 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 TMEM213A2RRL7 107 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 A8MWP6 167 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 H3BP45 60 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 GOSR2O14653 212 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 TGOLN2O43493 480 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 SSSCA1O60232 199 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 TSC22D2O75157 780 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 MED6O75586 246 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 DEDDO75618 318 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 OR8U8P0C7N1 319 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 IGLC1P0CG04 106 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 GPR183P32249 361 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 SNCAP37840 140 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
LRRC28-220ENST00000561253 GAMTQ14353 236 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 Q5BKY6 102 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 CLEC19AQ6UXS0 136 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 UNQ9165/PRO28630Q6UXU0 137 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 GSG1LQ6UXU4 331 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 GPHB5Q86YW7 130 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 PPP1R1CQ8WVI7 109 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 EEF1AKMT3Q96AZ1 226 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 C2orf48Q96LS8 159 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 CIB3Q96Q77 187 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-220ENST00000561253 RAB40CQ96S21 281 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 TXN2Q99757 166 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 LYRM2Q9NU23 88 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-220ENST00000561253 SIGLEC8Q9NYZ4 499 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 THYN1Q9P016 225 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 GSKIPQ9P0R6 139 aa4.46□□□□□ -1.7
LRRC28-220ENST00000561253 IGSF23A1L1A6 192 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 C5orf51A6NDU8 294 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 OR2T8A6NH00 312 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 FAM25EA8MYX2 175 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 G3V4G9 280 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 LGALS9O00182 355 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 CORTO00230 105 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 WRBO00258 174 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 GGCTO75223 188 aaKnown RBP4.45□□□□□ -1.7
LRRC28-220ENST00000561253 SAP30O75446 220 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 CLN5O75503 358 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 IFNA10P01566 189 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 ZP3P21754 424 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 GPX4P36969 197 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-220ENST00000561253 SYNJ2BPP57105 145 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 RRAS2P62070 204 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-220ENST00000561253 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 SLC16A13Q7RTY0 426 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 CACNG8Q8WXS5 425 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 ENY2Q9NPA8 101 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 OR5AC2Q9NZP5 309 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 MDFICQ9P1T7 246 aa4.45□□□□□ -1.7
LRRC28-220ENST00000561253 IGHV3-35A0A0C4DH35 117 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 FAM24AA6NFZ4 105 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 C2orf70A6NJV1 201 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 FNDC10F2Z333 226 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 NDUFA4O00483 81 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 OVOL1O14753 267 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 CYB5BO43169 146 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 SSNA1O43805 119 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 MPC2O95563 127 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 GIPP09681 153 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-220ENST00000561253 METTL15P1P0C7V9 234 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 C8orf88P0DMB2 117 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 SLC25A4P12235 298 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 IGLL1P15814 213 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 OPRK1P41145 380 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 RND2P52198 227 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 SUB1P53999 127 aaKnown RBP eCLIP4.44□□□□□ -1.7
LRRC28-220ENST00000561253 CYCSP99999 105 aaKnown RBP4.44□□□□□ -1.7
LRRC28-220ENST00000561253 ZNF674Q2M3X9 581 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 SPANXN5Q5MJ07 72 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 ACOT7LQ6ZUV0 252 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 COX8CQ7Z4L0 72 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 TMEM252Q8N6L7 170 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 OR9G4Q8NGQ1 327 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms