RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PSMB3P49720 205 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 PLP1P60201 277 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 OR11H2Q8NH07 326 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 NMES1Q9C002 83 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 C11orf68Q9H3H3 251 aaKnown RBP11.63□□□□□ -0.55
LMX1B-204ENST00000561065 SLC25A22Q9H936 323 aa11.63□□□□□ -0.55
LMX1B-204ENST00000561065 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
LMX1B-204ENST00000561065 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
LMX1B-204ENST00000561065 DEFB4AO15263 64 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 SULT1A1P50225 295 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 SLC38A11Q08AI6 406 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 C16orf92Q96LL3 132 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 LINC00052Q96N35 136 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 RPRMQ9NS64 109 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 UQCC1Q9NVA1 299 aa11.62□□□□□ -0.55
LMX1B-204ENST00000561065 E5RGE8 158 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 PET100P0DJ07 73 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 NANOS2P60321 138 aaKnown RBP11.61□□□□□ -0.55
LMX1B-204ENST00000561065 IFITM3Q01628 133 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 RAB32Q13637 225 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 LRRC20Q8TCA0 184 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
LMX1B-204ENST00000561065 RSG1Q9BU20 258 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 ARL6Q9H0F7 186 aa11.61□□□□□ -0.55
LMX1B-204ENST00000561065 AGPAT2O15120 278 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 MPDU1O75352 247 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 CST7O76096 145 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
LMX1B-204ENST00000561065 CAMLGP49069 296 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 IL15RAQ13261 267 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 Q8NAQ8 132 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 OR1L4Q8NGR5 311 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 SHANK2-AS3Q9BTD1 123 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 SLC25A39Q9BZJ4 359 aaPredicted RBP11.6□□□□□ -0.55
LMX1B-204ENST00000561065 FAM24AA6NFZ4 105 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 TMEM252Q8N6L7 170 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 PFDN5Q99471 154 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 DOK5Q9P104 306 aa11.6□□□□□ -0.55
LMX1B-204ENST00000561065 COX7A2P2O60397 106 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 CCNKO75909 580 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 LY6G6CO95867 125 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 TMEM182Q6ZP80 229 aaPredicted RBP11.59□□□□□ -0.55
LMX1B-204ENST00000561065 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 MFFQ9GZY8 342 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 ARV1Q9H2C2 271 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 DNAJC4Q9NNZ3 241 aa11.59□□□□□ -0.55
LMX1B-204ENST00000561065 H3BMM0 161 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 H3BRN7 92 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
LMX1B-204ENST00000561065 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 HLA-DRB4P13762 266 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 DEFB1P60022 68 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 BAXQ07812 192 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 FGL1Q08830 312 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 ARL16Q0P5N6 197 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
LMX1B-204ENST00000561065 BPIFA4PQ86YQ2 179 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 CSNK1G2-AS1Q8NCQ2 148 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 SLC25A32Q9H2D1 315 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 CLEC5AQ9NY25 188 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 HLA-DRB4X5D2U9 266 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 X6R8D5 127 aa11.58□□□□□ -0.56
LMX1B-204ENST00000561065 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 ZNF705EA8MWA4 302 aaPredicted RBP11.57□□□□□ -0.56
LMX1B-204ENST00000561065 DUSP14O95147 198 aaKnown RBP11.57□□□□□ -0.56
LMX1B-204ENST00000561065 PTTG1O95997 202 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 C10orf113Q5VZT2 155 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 LINC00305Q7Z4B0 112 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 C11orf45Q8TAV5 145 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 SAV1Q9H4B6 383 aaPredicted RBP11.57□□□□□ -0.56
LMX1B-204ENST00000561065 C11orf1Q9H5F2 150 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 WDR83OSQ9Y284 106 aa11.57□□□□□ -0.56
LMX1B-204ENST00000561065 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
LMX1B-204ENST00000561065 SOCS3O14543 225 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 SIX6O95475 246 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 MIFP14174 115 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 RPL29P47914 159 aaKnown RBP11.56□□□□□ -0.56
LMX1B-204ENST00000561065 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 OR4B1Q8NGF8 309 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 CHAC2Q8WUX2 184 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 SCRT1Q9BWW7 348 aa11.56□□□□□ -0.56
LMX1B-204ENST00000561065 CXCL2P19875 107 aa11.55□□□□□ -0.56
LMX1B-204ENST00000561065 PSG9Q00887 426 aa11.55□□□□□ -0.56
LMX1B-204ENST00000561065 LRRC37A5PQ49AS3 106 aa11.55□□□□□ -0.56
LMX1B-204ENST00000561065 PPP1R1CQ8WVI7 109 aa11.55□□□□□ -0.56
LMX1B-204ENST00000561065 MGST2Q99735 147 aa11.55□□□□□ -0.56
LMX1B-204ENST00000561065 IGSF23A1L1A6 192 aa11.54□□□□□ -0.56
LMX1B-204ENST00000561065 AMBPP02760 352 aa11.54□□□□□ -0.56
LMX1B-204ENST00000561065 FGF7P21781 194 aa11.54□□□□□ -0.56
LMX1B-204ENST00000561065 GUK1Q16774 197 aa11.54□□□□□ -0.56
LMX1B-204ENST00000561065 LCN15Q6UWW0 184 aa11.54□□□□□ -0.56
LMX1B-204ENST00000561065 UHRF2Q96PU4 802 aa11.54□□□□□ -0.56
LMX1B-204ENST00000561065 A0A087X0K7 114 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 UBE2L5PA0A1B0GUS4 154 aa11.53□□□□□ -0.56
LMX1B-204ENST00000561065 SMIM9A6NGZ8 99 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms