RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TMEM144Q7Z5S9 345 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 THAP8Q8NA92 274 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 FRZBQ92765 325 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 RBKSQ9H477 322 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 GPR132Q9UNW8 380 aa12.81□□□□□ -0.36
TPM1-226ENST00000560959 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 FAM25AB3EWG3 89 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 FAM25CB3EWG5 89 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 FAM25GB3EWG6 89 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 ADAP1O75689 374 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 SSBP1Q04837 148 aaKnown RBP12.8□□□□□ -0.36
TPM1-226ENST00000560959 OR5I1Q13606 314 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 MZT2AQ6P582 158 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 LINC00612Q8N6U2 182 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 SLC25A22Q9H936 323 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 KCNIP3Q9Y2W7 256 aa12.8□□□□□ -0.36
TPM1-226ENST00000560959 IGKV1OR2-108A0A075B7D4 117 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 TRAV8-2A0A0B4J237 113 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 DLK1P80370 383 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 Q5VSD8 79 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 Q6ZRN7 208 aaPredicted RBP12.79□□□□□ -0.36
TPM1-226ENST00000560959 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
TPM1-226ENST00000560959 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
TPM1-226ENST00000560959 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
TPM1-226ENST00000560959 ZNF586Q9NXT0 402 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
TPM1-226ENST00000560959 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
TPM1-226ENST00000560959 EREGO14944 169 aa12.78□□□□□ -0.36
TPM1-226ENST00000560959 RAB11AP62491 216 aa12.78□□□□□ -0.36
TPM1-226ENST00000560959 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
TPM1-226ENST00000560959 LINC00315P59091 139 aa12.77□□□□□ -0.37
TPM1-226ENST00000560959 C20orf144Q9BQM9 153 aa12.77□□□□□ -0.37
TPM1-226ENST00000560959 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 H7BYZ3 331 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 HTN1P15515 57 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 NCS1P62166 190 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 IGFL4Q6B9Z1 124 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 ZNF738Q8NE65 137 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 BPIFCQ8NFQ6 507 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 OR8A1Q8NGG7 326 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 PPP1R14DQ9NXH3 145 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 EXTL2Q9UBQ6 330 aa12.76□□□□□ -0.37
TPM1-226ENST00000560959 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 AKR1C4P17516 323 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 CDKN1BP46527 198 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 RHOBP62745 196 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 AP3S1Q92572 193 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 TMEM147Q9BVK8 224 aa12.75□□□□□ -0.37
TPM1-226ENST00000560959 A0A0J9YY99 117 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 ORM2P19652 201 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 HOXA5P20719 270 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 ERVFC1-1P60608 527 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 VBP1P61758 197 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 MRPS10P82664 201 aaKnown RBP12.74□□□□□ -0.37
TPM1-226ENST00000560959 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
TPM1-226ENST00000560959 LYZL2Q7Z4W2 148 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 OR1S1Q8NH92 325 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 PRRT1Q99946 306 aa12.74□□□□□ -0.37
TPM1-226ENST00000560959 A0A087WXM4 84 aa12.73□□□□□ -0.37
TPM1-226ENST00000560959 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
TPM1-226ENST00000560959 CXCL3P19876 107 aa12.73□□□□□ -0.37
TPM1-226ENST00000560959 PSG3Q16557 428 aa12.73□□□□□ -0.37
TPM1-226ENST00000560959 FAAP20Q6NZ36 180 aa12.73□□□□□ -0.37
TPM1-226ENST00000560959 SCGB3A2Q96PL1 93 aa12.73□□□□□ -0.37
TPM1-226ENST00000560959 PITX3O75364 302 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 ATP6V1G2O95670 118 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 IFNA5P01569 189 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 RPP30P78346 268 aaKnown RBP12.72□□□□□ -0.37
TPM1-226ENST00000560959 SRPXP78539 464 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 FGL1Q08830 312 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 FUNDC2Q9BWH2 189 aa12.72□□□□□ -0.37
TPM1-226ENST00000560959 SRRM2Q9UQ35 2752 aaKnown RBP12.72□□□□□ -0.37
TPM1-226ENST00000560959 A0A087X0K7 114 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 PRSS46E5RG02 174 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 H3BRN7 92 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 RLN2P04090 185 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 AKAIN1P0CW23 69 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 TMEM182Q6ZP80 229 aaPredicted RBP12.71□□□□□ -0.37
TPM1-226ENST00000560959 SHANK2-AS3Q9BTD1 123 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 PRR13Q9NZ81 148 aa12.71□□□□□ -0.37
TPM1-226ENST00000560959 A0A096LPF7 62 aa12.7□□□□□ -0.38
TPM1-226ENST00000560959 SIVA1O15304 175 aa12.7□□□□□ -0.38
TPM1-226ENST00000560959 GATA2P23769 480 aaPredicted RBP12.7□□□□□ -0.38
TPM1-226ENST00000560959 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
TPM1-226ENST00000560959 C18orf15Q96N68 181 aa12.7□□□□□ -0.38
TPM1-226ENST00000560959 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
TPM1-226ENST00000560959 FLG2Q5D862 2391 aaPredicted RBP12.69□□□□□ -0.38
TPM1-226ENST00000560959 DUXBA0A1W2PPF3 345 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 GAGE12BA1L429 117 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 MED6O75586 246 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 GAGE7O76087 117 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms