RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 DEFB4AO15263 64 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 RPL7P18124 248 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 C4BPBP20851 252 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 S100A11P31949 105 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 CAMLGP49069 296 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 DEFB1P60022 68 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 BAXQ07812 192 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 EBLN2Q6P2I7 272 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 SHANK2-AS3Q9BTD1 123 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 C1QTNF4Q9BXJ3 329 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 ARV1Q9H2C2 271 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 RNF24Q9Y225 148 aa9.48□□□□□ -0.89
CTDSPL2-209ENST00000560620 HLA-DRB4P13762 266 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 PLP1P60201 277 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 EWSR1Q01844 656 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 IL15RAQ13261 267 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 PXDC1Q5TGL8 231 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 GDF5OSQ5U4N7 250 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 Q6ZRG5 221 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 MGST2Q99735 147 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 NMES1Q9C002 83 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 SAV1Q9H4B6 383 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 C11orf1Q9H5F2 150 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 HLA-DRB4X5D2U9 266 aa9.47□□□□□ -0.89
CTDSPL2-209ENST00000560620 E5RGE8 158 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 F6UB75 175 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 SOCS3O14543 225 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 FGF7P21781 194 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 FXYD7P58549 80 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 C10orf113Q5VZT2 155 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.9
CTDSPL2-209ENST00000560620 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 GIG44P09565 113 aaPredicted RBP9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 FAM78BQ5VT40 261 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 SPATA31B1PQ5VZV4 182 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 MIC13Q5XKP0 118 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 IGFL4Q6B9Z1 124 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 PATE2Q6UY27 113 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 OR5AC2Q9NZP5 309 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 WDR83OSQ9Y284 106 aa9.45□□□□□ -0.9
CTDSPL2-209ENST00000560620 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 NUPR2A6NF83 97 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 JTBO76095 146 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 PET100P0DJ07 73 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 MIFP14174 115 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 H2BFSP57053 126 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 NHLH2Q02577 135 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 OR5C1Q8NGR4 320 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 OR1L4Q8NGR5 311 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 PPP1R1CQ8WVI7 109 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 C11orf68Q9H3H3 251 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-209ENST00000560620 IGHV4-28A0A0C4DH34 117 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 A0A0J9YX75 114 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 B2MP61769 119 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 PSG9Q00887 426 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 CLINT1Q14677 625 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 VWC2Q2TAL6 325 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 BPIFA4PQ86YQ2 179 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 THAP6Q8TBB0 222 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 PFDN5Q99471 154 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 MFFQ9GZY8 342 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 SLC35B3Q9H1N7 401 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
CTDSPL2-209ENST00000560620 STARD9Q9P2P6 4700 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 LCE6AA0A183 80 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 PTTG1O95997 202 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 RPL29P47914 159 aaKnown RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 CEMP1Q6PRD7 247 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 Q8NAQ8 132 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 CSNK1G2-AS1Q8NCQ2 148 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 TMEM37Q8WXS4 190 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 C17orf77Q96MU5 243 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 SLC39A9Q9NUM3 307 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 PPP1R14DQ9NXH3 145 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
CTDSPL2-209ENST00000560620 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 RYR3Q15413 4870 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 A0A087X0K7 114 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 ZNF705EA8MWA4 302 aaPredicted RBP9.41□□□□□ -0.9
CTDSPL2-209ENST00000560620 H0YIZ8 118 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 264.1 ms