RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SMAD5-AS1Q9Y6J3 95 aa10.55□□□□□ -0.72
PKNOX1-209ENST00000560448 A8MZ25 164 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 C17orf112F2Z3M2 114 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 MBP02144 154 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 IL4P05112 153 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 PSG1P11464 419 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 SELENOTP62341 195 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 PEA15Q15121 130 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 S100A7AQ86SG5 101 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 RPP25LQ8N5L8 163 aaKnown RBP10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 ZNF709Q8N972 641 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 SFT2D1Q8WV19 159 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 PRR25Q96S07 402 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 MGST2Q99735 147 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 SLC45A2Q9UMX9 530 aa10.54□□□□□ -0.72
PKNOX1-209ENST00000560448 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 IGKV1D-37A0A075B6S9 117 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 A0A1B0GV50 99 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 SCO1O75880 301 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 TEPPQ6URK8 271 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 RNF125Q96EQ8 232 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 PBDC1Q9BVG4 233 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 GGTLC1Q9BX51 225 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 SEC11CQ9BY50 192 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 RABAC1Q9UI14 185 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 RNF24Q9Y225 148 aa10.53□□□□□ -0.72
PKNOX1-209ENST00000560448 MEGF8Q7Z7M0 2845 aa10.52□□□□□ -0.72
PKNOX1-209ENST00000560448 SMCO3A2RU48 225 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 RBFOX3A6NFN3 312 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 OR4C46A6NHA9 309 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 APOC3P02656 99 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 PRB2P02812 416 aaPredicted RBP10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 PMS2P11Q13670 270 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 OR10G4Q8NGN3 311 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 OR10G9Q8NGN4 311 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 OR10G7Q8NGN6 311 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 SMDT1Q9H4I9 107 aa10.52□□□□□ -0.73
PKNOX1-209ENST00000560448 IGKV1OR2-108A0A075B7D4 117 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 IGHV3OR16-8A0A075B7F1 116 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 CTXND1A0A1B0GTU2 59 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 HELTA6NFD8 242 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 F8W036 122 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 SFTA3P0C7M3 94 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 M6PRP20645 277 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 EDN2P20800 178 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 RAB31Q13636 194 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 GUCA2BQ16661 112 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 DEFB121Q5J5C9 76 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 ZNF506Q5JVG8 444 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 C1orf194Q5T5A4 169 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 ATRAIDQ6UW56 229 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 RNF2Q99496 336 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 RARRES2Q99969 163 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 U3KQE9 123 aa10.51□□□□□ -0.73
PKNOX1-209ENST00000560448 MAP1LC3B2A6NCE7 125 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 IZUMO1RA6ND01 250 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 ZNF207O43670 478 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 ZNF90Q03938 601 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 ICAM4Q14773 271 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 USF2Q15853 346 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 MIC13Q5XKP0 118 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 FAM90A2PQ658T7 463 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 LCN15Q6UWW0 184 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 B9D2Q9BPU9 175 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 ACTR3CQ9C0K3 210 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 MAP1LC3BQ9GZQ8 125 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 EIF5A2Q9GZV4 153 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 SLC39A9Q9NUM3 307 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 LOC102723971A0A1B0GUV8 181 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 BUB3O43684 328 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 RPL29P47914 159 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 FGF8P55075 233 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 CD81P60033 236 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PLP1P60201 277 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PRR20EP86478 221 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PRR20CP86479 221 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PRR20DP86480 221 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PRR20BP86481 221 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PRR20AP86496 221 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 CYP2G1PQ6ZSU1 146 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 Q8N1Y9 231 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 RAB24Q969Q5 203 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 KCNIP2Q9NS61 270 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 PXMP4Q9Y6I8 212 aa10.5□□□□□ -0.73
PKNOX1-209ENST00000560448 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 LINC00869P0C866 280 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 HAGHQ16775 308 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 KHDC3LQ587J8 217 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 SAMD13Q5VXD3 122 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
PKNOX1-209ENST00000560448 SLC35B3Q9H1N7 401 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms