RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 TMEM217Q8N7C4 229 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 MGST2Q99735 147 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 ARL6Q9H0F7 186 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 C11orf68Q9H3H3 251 aaKnown RBP8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 SAV1Q9H4B6 383 aaPredicted RBP8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 BATF3Q9NR55 127 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 HIGD1AQ9Y241 93 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 X6R8D5 127 aa8.45□□□□□ -1.06
RABGGTA-216ENST00000560243 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 ZNF705EA8MWA4 302 aaPredicted RBP8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 INMT-MINDY4F8WBC2 141 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 GOSR2O14653 212 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 AGPAT2O15120 278 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 RAP2BP61225 183 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 CEMP1Q6PRD7 247 aaPredicted RBP8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 C16orf92Q96LL3 132 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 GGACTQ9BVM4 153 aa8.44□□□□□ -1.06
RABGGTA-216ENST00000560243 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 FGL1Q08830 312 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 TMEM41BQ5BJD5 291 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 FOXI2Q6ZQN5 318 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 RNF182Q8N6D2 247 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 TMEM252Q8N6L7 170 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 ZNF709Q8N972 641 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 PHLDA1Q8WV24 401 aaPredicted RBP8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 MARVELD1Q9BSK0 173 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 SLC35B3Q9H1N7 401 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 ARV1Q9H2C2 271 aa8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 GPN1Q9HCN4 374 aaPredicted RBP8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 LYRM2Q9NU23 88 aaPredicted RBP8.43□□□□□ -1.06
RABGGTA-216ENST00000560243 ELOA3CA0A087WX78 387 aaPredicted RBP8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 A0A0J9YX75 114 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 NUPR2A6NF83 97 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 SNRPCP09234 159 aaKnown RBP8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 ZNF705DP0CH99 300 aaPredicted RBP8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 ZNF705BP0CI00 300 aaPredicted RBP8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 PVALBP20472 110 aaPredicted RBP8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 MEOX2P50222 304 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 SULT1A1P50225 295 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 FAM78BQ5VT40 261 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 TMEM37Q8WXS4 190 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 GPR82Q96P67 336 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 WDR83OSQ9Y284 106 aa8.42□□□□□ -1.06
RABGGTA-216ENST00000560243 UBE2L5PA0A1B0GUS4 154 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 H0YIZ8 118 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 MRPS12O15235 138 aaKnown RBP8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 PRAF2O60831 178 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 JTBO76095 146 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 MIFP14174 115 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 CAMLGP49069 296 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 H2BFSP57053 126 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 NUTF2P61970 127 aaKnown RBP8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 VWC2Q2TAL6 325 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 MIC13Q5XKP0 118 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 EBLN2Q6P2I7 272 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 LINC00305Q7Z4B0 112 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 RPRMQ9NS64 109 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 UQCC1Q9NVA1 299 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 OR5AC2Q9NZP5 309 aa8.41□□□□□ -1.06
RABGGTA-216ENST00000560243 H3BTX0 84 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 COX7A2P2O60397 106 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 S100A7P31151 101 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 DEFA1P59665 94 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 DEFA3P59666 94 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 PRR20EP86478 221 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 PRR20CP86479 221 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 PRR20DP86480 221 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 PRR20BP86481 221 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 PRR20AP86496 221 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 PSG9Q00887 426 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 NHLH2Q02577 135 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 SAMD13Q5VXD3 122 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 AMTNQ6UX39 209 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 ZNF705AQ6ZN79 300 aaPredicted RBP8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 CLUHP3Q96NS8 147 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 C1QTNF4Q9BXJ3 329 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 CELA1Q9UNI1 258 aa8.4□□□□□ -1.06
RABGGTA-216ENST00000560243 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 A0A087X0K7 114 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 TRAV5A0A0B4J249 113 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 A8MTW9 85 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 ZNF705FA8MVS1 300 aaPredicted RBP8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 S100A11P31949 105 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 BAXQ07812 192 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 OPCMLQ14982 345 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 PXDC1Q5TGL8 231 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 SPATA31B1PQ5VZV4 182 aa8.39□□□□□ -1.07
RABGGTA-216ENST00000560243 STX12Q86Y82 276 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms