RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 OR4F17Q8NGA8 305 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 OR1L4Q8NGR5 311 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 GLMPQ8WWB7 406 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 RAB24Q969Q5 203 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 OR4F4Q96R69 305 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 RHPN1-AS1Q9BWJ2 59 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 SCRT1Q9BWW7 348 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 MLXQ9UH92 298 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 RABAC1Q9UI14 185 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 FUT9Q9Y231 359 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 HIGD1AQ9Y241 93 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 UFC1Q9Y3C8 167 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 SELENOKQ9Y6D0 94 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 UMAD1C9J7I0 102 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 COX7A2P2O60397 106 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 MBP02144 154 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 STAG3L2P0CL84 134 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 STAG3L3P0CL85 134 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 DEFB114Q30KQ6 69 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 FAM122CQ6P4D5 195 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 LYPD6BQ8NI32 183 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 SUN5Q8TC36 379 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 METTL26Q96S19 204 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 PFDN5Q99471 154 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 RNF2Q99496 336 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 KCNIP2Q9NS61 270 aa7.07□□□□□ -1.28
HERC1-206ENST00000559996 H3BQ15 152 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 HMGB3O15347 200 aaKnown RBP7.06□□□□□ -1.28
HERC1-206ENST00000559996 PF4P02776 101 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 GP9P14770 177 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 CCL20P78556 96 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 AKR1C8PQ5T2L2 129 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 C1orf194Q5T5A4 169 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 DPPA3Q6W0C5 159 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 ELOVL1Q9BW60 279 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 MRPL32Q9BYC8 188 aaKnown RBP7.06□□□□□ -1.28
HERC1-206ENST00000559996 SLC25A22Q9H936 323 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 PEMTQ9UBM1 199 aa7.06□□□□□ -1.28
HERC1-206ENST00000559996 TRAV1-1A0A0B4J248 108 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 CTXND1A0A1B0GTU2 59 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 IZUMO1RA6ND01 250 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 ZNF785A8K8V0 405 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 IGLV1-51P01701 117 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 IGLC2P0DOY2 106 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 PYYP10082 97 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 CDC34P49427 236 aaPredicted RBP7.05□□□□□ -1.28
HERC1-206ENST00000559996 RAB5CP51148 216 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 RHOBP62745 196 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 EIF5AL1Q6IS14 154 aaKnown RBP7.05□□□□□ -1.28
HERC1-206ENST00000559996 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 PCNPQ8WW12 178 aaKnown RBP7.05□□□□□ -1.28
HERC1-206ENST00000559996 MARC2Q969Z3 335 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 FXYD5Q96DB9 178 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 SAT2Q96F10 170 aaPredicted RBP7.05□□□□□ -1.28
HERC1-206ENST00000559996 ACTR3CQ9C0K3 210 aaPredicted RBP7.05□□□□□ -1.28
HERC1-206ENST00000559996 TMPRSS5Q9H3S3 457 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 ZNF586Q9NXT0 402 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 TMEM14CQ9P0S9 112 aa7.05□□□□□ -1.28
HERC1-206ENST00000559996 A0A1W2PPV4 95 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 A0A1W2PS18 150 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 M0QZ24 198 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 SOCS3O14543 225 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 RGS13O14921 159 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 NDUFB4O95168 129 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 NMBP08949 121 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 SNRPCP09234 159 aaKnown RBP7.04□□□□□ -1.28
HERC1-206ENST00000559996 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
HERC1-206ENST00000559996 LCN15Q6UWW0 184 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 FAM213BQ8TBF2 198 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 DCANP1Q8TF63 244 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 OR51M1Q9H341 326 aa7.04□□□□□ -1.28
HERC1-206ENST00000559996 A0A087X0K7 114 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 ZNF705EA8MWA4 302 aaPredicted RBP7.03□□□□□ -1.28
HERC1-206ENST00000559996 IFNA7P01567 189 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 H2AFB1P0C5Y9 115 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 ARL14EPLP0DKL9 152 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 HIST1H1EP10412 219 aaKnown RBP7.03□□□□□ -1.28
HERC1-206ENST00000559996 IGLL1P15814 213 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
HERC1-206ENST00000559996 PRR31Q5SQ13 230 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 SIGLEC15Q6ZMC9 328 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 BPIFA4PQ86YQ2 179 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 TMEM61Q8N0U2 210 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 OR8I2Q8N0Y5 310 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 PAXXQ9BUH6 204 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 UBQLN2Q9UHD9 624 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 ZNF256Q9Y2P7 627 aaPredicted RBP7.03□□□□□ -1.28
HERC1-206ENST00000559996 SORL1Q92673 2214 aa7.03□□□□□ -1.28
HERC1-206ENST00000559996 TRBV19A0A075B6N1 114 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 TRAV8-2A0A0B4J237 113 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 MAP1LC3B2A6NCE7 125 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 H3BTX0 84 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 SLC17A3O00476 420 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 TSPAN4O14817 238 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 SAP30O75446 220 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 OR10J4P0C629 311 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 NBEAP1P0C6P0 100 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms