RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PSME4Q14997 1843 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 BOD1L2Q8IYS8 172 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 MPZP25189 248 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 TRPM7Q96QT4 1865 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 ACYP1P07311 99 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 AZU1P20160 251 aa11.41□□□□□ -0.58
CSPG4P12-202ENST00000559989 CLPSP04118 112 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 ORMDL1Q9P0S3 153 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 PLXNA1Q9UIW2 1896 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 PTPRDP23468 1912 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 A0A087WWL8 130 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 RNASE6Q93091 150 aaKnown RBP11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 TEX48A0A1B0GUV7 120 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 THBDP07204 575 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 TFF2Q03403 129 aa11.4□□□□□ -0.58
CSPG4P12-202ENST00000559989 STRCQ7RTU9 1775 aa11.4□□□□□ -0.59
CSPG4P12-202ENST00000559989 RP1L1Q8IWN7 2480 aaPredicted RBP11.4□□□□□ -0.59
CSPG4P12-202ENST00000559989 C11orf44Q8N8P7 122 aa11.4□□□□□ -0.59
CSPG4P12-202ENST00000559989 KLHDC3Q9BQ90 382 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 NDUFB1O75438 58 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 FAM27E3Q08E93 113 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 AMN1Q8IY45 258 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 UBE2E2Q96LR5 201 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 TIMM23O14925 209 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 CCL3L1P16619 93 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 SMRP1Q8NCR6 262 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 SMKR1H3BMG3 65 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 K7EP34 96 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 RHODO00212 210 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 LINC01590Q5TEZ4 76 aa11.39□□□□□ -0.59
CSPG4P12-202ENST00000559989 J3KT08 172 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 DEFB105AQ8NG35 78 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 K7EP13 123 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 CD24P25063 80 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 DAD1P61803 113 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 C15orf53Q8NAA6 179 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 PAPPAQ13219 1627 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 THADAQ6YHU6 1953 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 IGHV1-2P23083 117 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 PSG7Q13046 419 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 A8MWP6 167 aa11.38□□□□□ -0.59
CSPG4P12-202ENST00000559989 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 SLC22A18ASQ8N1D0 253 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 A0A1W2PPM0 123 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 LINC01551Q86U37 167 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 MINOS1-NBL1R4GNA1 71 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 NHSQ6T4R5 1651 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 IGKV1-8A0A0C4DH67 115 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 BVES-AS1Q5T3Y7 98 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 RNF114Q9Y508 228 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 ZNF362Q5T0B9 420 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 PLAC1Q9HBJ0 212 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 F5H768 121 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 K7ERS5 55 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 MRPL55Q7Z7F7 128 aaKnown RBP11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
CSPG4P12-202ENST00000559989 A0A1W2PR77 199 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 FGF16O43320 207 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 PROP1O75360 226 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 ID3Q02535 119 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 TREML4Q6UXN2 200 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 A0A1B0GWJ7 208 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 COLCA2A8K830 154 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 KLHL30-AS1Q8NEE0 82 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 UBE2BP63146 152 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 TSC2P49815 1807 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 DEFB130BP0DP73 79 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 DEFB130AP0DP74 79 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 SLC25A16P16260 332 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 ATOX1O00244 68 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 FOXL2P58012 376 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 WFDC1Q9HC57 220 aa11.36□□□□□ -0.59
CSPG4P12-202ENST00000559989 A0A1B0GX51 115 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 RNASE2P10153 161 aaKnown RBP11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 CFHR2P36980 270 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 WDR83OSQ9Y284 106 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 MRPS18CQ9Y3D5 142 aaKnown RBP11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 A0A0A6YYD4 124 aa11.35□□□□□ -0.59
CSPG4P12-202ENST00000559989 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms