RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 IGLV2-11P01706 119 aa7.93□□□□□ -1.14
LRRC28-216ENST00000559819 FOXA3P55318 350 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-216ENST00000559819 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
LRRC28-216ENST00000559819 NBASA2RRP1 2371 aa7.93□□□□□ -1.14
LRRC28-216ENST00000559819 SH2D7A6NKC9 451 aaPredicted RBP7.93□□□□□ -1.14
LRRC28-216ENST00000559819 DYNAPQ8N1N2 210 aa7.93□□□□□ -1.14
LRRC28-216ENST00000559819 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
LRRC28-216ENST00000559819 RAB1BQ9H0U4 201 aa7.93□□□□□ -1.14
LRRC28-216ENST00000559819 SVEP1Q4LDE5 3571 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 ZNF785A8K8V0 405 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 TCAPO15273 167 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 OR2J3O76001 311 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 IGHV3-23P01764 117 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 IL4P05112 153 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 SSTP61278 116 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 HBBP68871 147 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 PMCHL1Q16048 86 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 SPATA45Q537H7 98 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 DAZAP1Q96EP5 407 aaKnown RBP7.92□□□□□ -1.14
LRRC28-216ENST00000559819 TMEM14CQ9P0S9 112 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 ZNF492Q9P255 531 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 ATRXP46100 2492 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 LOC105371242A0A075B767 164 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 H3BRN7 92 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 M0R2Z0 102 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 HSBP1O75506 76 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 G0S2P27469 103 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 NDPQ00604 133 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 KLF5Q13887 457 aaPredicted RBP7.92□□□□□ -1.14
LRRC28-216ENST00000559819 BATFQ16520 125 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 OR11H6Q8NGC7 330 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 BORCS7Q96B45 105 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 SMIM12Q96EX1 92 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 RNF5Q99942 180 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 SHANK2-AS3Q9BTD1 123 aa7.92□□□□□ -1.14
LRRC28-216ENST00000559819 A8MWL6 223 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 FCGR2BP31994 310 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-216ENST00000559819 CTRLP40313 264 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 ZNF491Q8N8L2 437 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 HRNRQ86YZ3 2850 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-216ENST00000559819 TRBV19A0A075B6N1 114 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 ODF3BA8MYP8 253 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 M0R3E3 92 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 HLA-DRB1P01911 266 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 COL8A1P27658 744 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 C11orf71Q6IPW1 123 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 SPATA12Q7Z6I5 190 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 RNF125Q96EQ8 232 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 ZC2HC1AQ96GY0 325 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 TIMD4Q96H15 378 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 CLEC5AQ9NY25 188 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 MSRB2Q9Y3D2 182 aa7.91□□□□□ -1.14
LRRC28-216ENST00000559819 FAM181BA6NEQ2 426 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 NDUFS7O75251 213 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 NDUFA3O95167 84 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 IGLC2P0DOY2 106 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 C5orf64Q2M2E5 130 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 NPBQ8NG41 125 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 OR4B1Q8NGF8 309 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 FANCD2OSQ96PS1 177 aa7.9□□□□□ -1.14
LRRC28-216ENST00000559819 NCBP2LA6PVI3 153 aaKnown RBP7.9□□□□□ -1.15
LRRC28-216ENST00000559819 CT83Q5H943 113 aa7.9□□□□□ -1.15
LRRC28-216ENST00000559819 C16orf54Q6UWD8 224 aa7.9□□□□□ -1.15
LRRC28-216ENST00000559819 RBPMS2Q6ZRY4 209 aaKnown RBP7.9□□□□□ -1.15
LRRC28-216ENST00000559819 VMO1Q7Z5L0 202 aa7.9□□□□□ -1.15
LRRC28-216ENST00000559819 BPIFA4PQ86YQ2 179 aa7.9□□□□□ -1.15
LRRC28-216ENST00000559819 OR4F17Q8NGA8 305 aa7.9□□□□□ -1.15
LRRC28-216ENST00000559819 SRSF8Q9BRL6 282 aaKnown RBP7.9□□□□□ -1.15
LRRC28-216ENST00000559819 A0A1W2PPR1 153 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 MRPS12O15235 138 aaKnown RBP7.89□□□□□ -1.15
LRRC28-216ENST00000559819 GNG7O60262 68 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 HOXB4P17483 251 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-216ENST00000559819 PRTN3P24158 256 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 ZFP36P26651 326 aaKnown RBP7.89□□□□□ -1.15
LRRC28-216ENST00000559819 KLRB1Q12918 225 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 Q56UQ5 140 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-216ENST00000559819 OVOL3O00110 214 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 CEACAM3P40198 252 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 ZNF414Q96IQ9 312 aa7.89□□□□□ -1.15
LRRC28-216ENST00000559819 IGLV11-55A0A075B6I3 123 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 WI2-2373I1.2A0A1W2PRP0 233 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 M0R1W7 72 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 NDUFB8O95169 186 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 ZNF138P52744 262 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 NHLH1Q02575 133 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 ARPC1AQ92747 370 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 C8orf49Q96NF6 230 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 PSG8Q9UQ74 426 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 IGHV3OR16-8A0A075B7F1 116 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 APOHP02749 345 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-216ENST00000559819 CRIP1P50238 77 aa7.88□□□□□ -1.15
LRRC28-216ENST00000559819 FAM120AOSQ5T036 256 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms