RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 AQP10Q96PS8 301 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 DNAJC4Q9NNZ3 241 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 PXMP4Q9Y6I8 212 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 NBEAL2Q6ZNJ1 2754 aa15.04■□□□□ -0
TSPAN3-207ENST00000559494 ELOA3CA0A087WX78 387 aaPredicted RBP15.03■□□□□ -0
TSPAN3-207ENST00000559494 COX7A2P2O60397 106 aa15.03■□□□□ -0
TSPAN3-207ENST00000559494 HAGHQ16775 308 aa15.03■□□□□ -0
TSPAN3-207ENST00000559494 LINC00305Q7Z4B0 112 aa15.03■□□□□ -0
TSPAN3-207ENST00000559494 FXYD6-FXYD2A0A087WZ82 144 aa15.02■□□□□ -0
TSPAN3-207ENST00000559494 ZNF688P0C7X2 276 aa15.02■□□□□ -0
TSPAN3-207ENST00000559494 MORN5Q5VZ52 161 aa15.02■□□□□ -0
TSPAN3-207ENST00000559494 C10orf113Q5VZT2 155 aa15.02■□□□□ -0
TSPAN3-207ENST00000559494 ST6GAL2Q96JF0 529 aa15.02■□□□□ -0
TSPAN3-207ENST00000559494 RSG1Q9BU20 258 aa15.02■□□□□ -0
TSPAN3-207ENST00000559494 IFNA5P01569 189 aa15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 NHLRC4P0CG21 123 aaPredicted RBP15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 GALR1P47211 349 aa15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 S100A7AQ86SG5 101 aa15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 OR1L4Q8NGR5 311 aa15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 GPR82Q96P67 336 aa15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 TNFSF18Q9UNG2 199 aa15.01□□□□□ -0.01
TSPAN3-207ENST00000559494 RNF222A6NCQ9 220 aa15□□□□□ -0.01
TSPAN3-207ENST00000559494 SOCS3O14543 225 aa15□□□□□ -0.01
TSPAN3-207ENST00000559494 GCSAMLQ5JQS6 135 aa15□□□□□ -0.01
TSPAN3-207ENST00000559494 ZNF709Q8N972 641 aa15□□□□□ -0.01
TSPAN3-207ENST00000559494 SCGB1C1Q8TD33 95 aa15□□□□□ -0.01
TSPAN3-207ENST00000559494 PARD6GQ9BYG4 376 aaPredicted RBP15□□□□□ -0.01
TSPAN3-207ENST00000559494 SEPSECSQ9HD40 501 aaKnown RBP15□□□□□ -0.01
TSPAN3-207ENST00000559494 LOC102724200A0A096LPH7 203 aaPredicted RBP14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 MRPS12O15235 138 aaKnown RBP14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 RPL7P18124 248 aaKnown RBP14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 INO80EQ8NBZ0 244 aaPredicted RBP14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 OR11H4Q8NGC9 324 aa14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 PFDN5Q99471 154 aa14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 RFNGQ9Y644 331 aa14.99□□□□□ -0.01
TSPAN3-207ENST00000559494 TRAV5A0A0B4J249 113 aa14.98□□□□□ -0.01
TSPAN3-207ENST00000559494 PSMG4Q5JS54 123 aa14.98□□□□□ -0.01
TSPAN3-207ENST00000559494 GATAD1Q8WUU5 269 aa14.98□□□□□ -0.01
TSPAN3-207ENST00000559494 TM2D3Q9BRN9 247 aa14.98□□□□□ -0.01
TSPAN3-207ENST00000559494 TENM3Q9P273 2699 aa14.97□□□□□ -0.01
TSPAN3-207ENST00000559494 C17orf112F2Z3M2 114 aa14.97□□□□□ -0.01
TSPAN3-207ENST00000559494 RPL35AP18077 110 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-207ENST00000559494 SNRPD3P62318 126 aaKnown RBP14.97□□□□□ -0.01
TSPAN3-207ENST00000559494 RNF24Q9Y225 148 aa14.97□□□□□ -0.01
TSPAN3-207ENST00000559494 KNCNA6PVL3 124 aa14.96□□□□□ -0.01
TSPAN3-207ENST00000559494 MEOX2P50222 304 aa14.96□□□□□ -0.01
TSPAN3-207ENST00000559494 CD300CQ08708 224 aa14.96□□□□□ -0.01
TSPAN3-207ENST00000559494 ISLRO14498 428 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 ARPC5O15511 151 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 ATF4P18848 351 aaPredicted RBP14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 ID1P41134 155 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 PSMB3P49720 205 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 TCTE3Q8IZS6 198 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 C16orf92Q96LL3 132 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 LINC00052Q96N35 136 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 KCNIP2Q9NS61 270 aa14.95□□□□□ -0.02
TSPAN3-207ENST00000559494 A0A087X0K7 114 aa14.94□□□□□ -0.02
TSPAN3-207ENST00000559494 SPATA31B1PQ5VZV4 182 aa14.94□□□□□ -0.02
TSPAN3-207ENST00000559494 IGFL4Q6B9Z1 124 aa14.94□□□□□ -0.02
TSPAN3-207ENST00000559494 AKAP14Q86UN6 197 aa14.94□□□□□ -0.02
TSPAN3-207ENST00000559494 BPIFA4PQ86YQ2 179 aa14.94□□□□□ -0.02
TSPAN3-207ENST00000559494 C20orf173Q96LM9 149 aa14.94□□□□□ -0.02
TSPAN3-207ENST00000559494 TRAV8-2A0A0B4J237 113 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 SNRPCP09234 159 aaKnown RBP14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 DEFB1P60022 68 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 ZNF266Q14584 549 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 ACTL10Q5JWF8 245 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 FFAR4Q5NUL3 377 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 FAM78BQ5VT40 261 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 SAMD13Q5VXD3 122 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 ZMAT4Q9H898 229 aa14.93□□□□□ -0.02
TSPAN3-207ENST00000559494 KIR2DL5BA0A0G2JN68 375 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 KIR2DL5BA0A0G2JPC4 375 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 MIR17HGQ75NE6 70 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 STHQ8IWL8 128 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 KIR2DL5AQ8N109 375 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 KIR2DL5BQ8NHK3 375 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 MFFQ9GZY8 342 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 TIMM9Q9Y5J7 89 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 U3KQK5 164 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 STAB2Q8WWQ8 2551 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 H3BQ15 152 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 IGLC2P0DOY2 106 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 APOC4P55056 127 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 RPL7L1Q6DKI1 246 aaKnown RBP14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 TRPT1Q86TN4 253 aaKnown RBP14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 HSD17B11Q8NBQ5 300 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 FAM167A-AS1Q96KT0 104 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 SPATA25Q9BR10 227 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 CSTL1Q9H114 145 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 RETNQ9HD89 108 aa14.92□□□□□ -0.02
TSPAN3-207ENST00000559494 HMSDA8MTL9 139 aa14.91□□□□□ -0.02
TSPAN3-207ENST00000559494 H3BTX0 84 aa14.91□□□□□ -0.02
TSPAN3-207ENST00000559494 GDF5OSQ5U4N7 250 aa14.91□□□□□ -0.02
TSPAN3-207ENST00000559494 RCHY1Q96PM5 261 aa14.91□□□□□ -0.02
TSPAN3-207ENST00000559494 H3BMM0 161 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 UBE2CO00762 179 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 CXCL2P19875 107 aa14.9□□□□□ -0.02
TSPAN3-207ENST00000559494 ATP6V0CP27449 155 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms