RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 DUSP14O95147 198 aaKnown RBP10.63□□□□□ -0.71
LRRC28-213ENST00000559399 IFNA21P01568 189 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 HTN3P15516 51 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
LRRC28-213ENST00000559399 OXA1LQ15070 435 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 SPANXN2Q5MJ10 180 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 AMTNQ6UX39 209 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 TMEM144Q7Z5S9 345 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 UBE2DNLQ8IWF7 75 aa10.63□□□□□ -0.71
LRRC28-213ENST00000559399 H3BRN7 92 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 M0R2N4 97 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 SSSCA1O60232 199 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 INSP01308 110 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 IL5P05113 134 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 INPP1P49441 399 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 CNN1P51911 297 aaKnown RBP10.62□□□□□ -0.71
LRRC28-213ENST00000559399 RAP2BP61225 183 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 ID3Q02535 119 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 FGL1Q08830 312 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 SHANK2-AS3Q9BTD1 123 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 SLC25A39Q9BZJ4 359 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-213ENST00000559399 SRRQ9GZT4 340 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 PSENENQ9NZ42 101 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
LRRC28-213ENST00000559399 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 NAP1L6A6NFF2 107 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 NDUFB6O95139 128 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 LINC00869P0C866 280 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
LRRC28-213ENST00000559399 SPINK13Q1W4C9 94 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 TRIQKQ629K1 86 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 RNF182Q8N6D2 247 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 HIGD1AQ9Y241 93 aa10.61□□□□□ -0.71
LRRC28-213ENST00000559399 KIAA1109Q2LD37 5005 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 PRSS29PA6NIE9 313 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 M0R2Z0 102 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 HYPMO75409 117 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 DAD1P61803 113 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 ZNF738Q8NE65 137 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 OR11H7Q8NGC8 314 aa10.6□□□□□ -0.71
LRRC28-213ENST00000559399 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 RTL8CO15255 209 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 OR5G3P0C626 314 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 PLP1P60201 277 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 B2MP61769 119 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 SELENOTP62341 195 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 S100A7AQ86SG5 101 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 RBM38Q9H0Z9 239 aaKnown RBP10.59□□□□□ -0.71
LRRC28-213ENST00000559399 FLVCR2Q9UPI3 526 aa10.59□□□□□ -0.71
LRRC28-213ENST00000559399 IGLV2-18A0A075B6J9 118 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 CRXO43186 299 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-213ENST00000559399 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 OR4E1P0C645 316 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 RRAS2P62070 204 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-213ENST00000559399 DLK1P80370 383 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 BAK1Q16611 211 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 RNF212Q495C1 297 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 C4orf46Q504U0 113 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 BAP18Q8IXM2 172 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 UHRF2Q96PU4 802 aa10.58□□□□□ -0.72
LRRC28-213ENST00000559399 A0A087X0K7 114 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 LYRM9A8MSI8 78 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 ZNF705GA8MUZ8 300 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-213ENST00000559399 FNDC10F2Z333 226 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 K7EPK0 472 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 ZNF701M0R085 212 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-213ENST00000559399 METTL15P1P0C7V9 234 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 CXCL3P19876 107 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
LRRC28-213ENST00000559399 TSPOP30536 169 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 HIST1H1AQ02539 215 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-213ENST00000559399 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 OR10P1Q8NGE3 313 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 NPVFQ9HCQ7 196 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 MGAT4CQ9UBM8 478 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
LRRC28-213ENST00000559399 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 LINC00854A0A1B0GVQ3 168 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 CENPXA8MT69 81 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 TSC22D2O75157 780 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 CCNKO75909 580 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 PRM2P04554 102 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 RHOBP62745 196 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 SLC38A11Q08AI6 406 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 IAH1Q2TAA2 248 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-213ENST00000559399 Q6ZR54 194 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 ZNF546Q86UE3 836 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 OR8A1Q8NGG7 326 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 LRRC20Q8TCA0 184 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 ARL6Q9H0F7 186 aa10.56□□□□□ -0.72
LRRC28-213ENST00000559399 PPP1R14DQ9NXH3 145 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms