RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 UHRF2Q96PU4 802 aa7.95□□□□□ -1.14
SPG11-216ENST00000559347 SHANK2-AS3Q9BTD1 123 aa7.95□□□□□ -1.14
SPG11-216ENST00000559347 GGACTQ9BVM4 153 aa7.95□□□□□ -1.14
SPG11-216ENST00000559347 CLEC5AQ9NY25 188 aa7.95□□□□□ -1.14
SPG11-216ENST00000559347 HIGD1AQ9Y241 93 aa7.95□□□□□ -1.14
SPG11-216ENST00000559347 X6R8D5 127 aa7.95□□□□□ -1.14
SPG11-216ENST00000559347 IGHV4-28A0A0C4DH34 117 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 AGPAT2O15120 278 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 DEFB4AO15263 64 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 MIFP14174 115 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 S100A7P31151 101 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 CAV2P51636 162 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 S100A10P60903 97 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 RAP2BP61225 183 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 NUTF2P61970 127 aaKnown RBP7.94□□□□□ -1.14
SPG11-216ENST00000559347 RAB32Q13637 225 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 NRARPQ7Z6K4 114 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 ZNF546Q86UE3 836 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 C16orf92Q96LL3 132 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 C20orf173Q96LM9 149 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 LINC00052Q96N35 136 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 MGST2Q99735 147 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 C1QTNF4Q9BXJ3 329 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 ARL6Q9H0F7 186 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 BATF3Q9NR55 127 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 LYRM2Q9NU23 88 aaPredicted RBP7.94□□□□□ -1.14
SPG11-216ENST00000559347 PGPEP1Q9NXJ5 209 aa7.94□□□□□ -1.14
SPG11-216ENST00000559347 A0A0J9YX75 114 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 FAM24AA6NFZ4 105 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 F6UB75 175 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 HYPMO75409 117 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 DEDDO75618 318 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 CST7O76096 145 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 OR5G3P0C626 314 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 RBMY1A1P0DJD3 496 aaKnown RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 RBMY1CP0DJD4 496 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 PVALBP20472 110 aaPredicted RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 BCAP31P51572 246 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 RBMY1FQ15415 496 aaKnown RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 CEMP1Q6PRD7 247 aaPredicted RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 PATE2Q6UY27 113 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 ZNF709Q8N972 641 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 PHLDA1Q8WV24 401 aaPredicted RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 CLUHP3Q96NS8 147 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 RSG1Q9BU20 258 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 MFFQ9GZY8 342 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 GPN1Q9HCN4 374 aaPredicted RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 RPRMQ9NS64 109 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 XCL2Q9UBD3 114 aa7.93□□□□□ -1.14
SPG11-216ENST00000559347 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
SPG11-216ENST00000559347 VPS13DQ5THJ4 4388 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 DNAH6Q9C0G6 4158 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 A0A087X0K7 114 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 IGSF23A1L1A6 192 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 GOSR2O14653 212 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 PRAF2O60831 178 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 IGKV3-20P01619 116 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 RPL7P18124 248 aaKnown RBP7.92□□□□□ -1.14
SPG11-216ENST00000559347 SULT1A1P50225 295 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 VWC2Q2TAL6 325 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 PXDC1Q5TGL8 231 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 SPATA31B1PQ5VZV4 182 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 C11orf45Q8TAV5 145 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 LINC00476Q8WZB0 136 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 ARV1Q9H2C2 271 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 UQCC1Q9NVA1 299 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 WDR83OSQ9Y284 106 aa7.92□□□□□ -1.14
SPG11-216ENST00000559347 ELOA3CA0A087WX78 387 aaPredicted RBP7.91□□□□□ -1.14
SPG11-216ENST00000559347 TRAV8-2A0A0B4J237 113 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 UBE2L5PA0A1B0GUS4 154 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 A8MTW9 85 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 MRPS12O15235 138 aaKnown RBP7.91□□□□□ -1.14
SPG11-216ENST00000559347 FAM78BQ5VT40 261 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 ZNF705AQ6ZN79 300 aaPredicted RBP7.91□□□□□ -1.14
SPG11-216ENST00000559347 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 STX12Q86Y82 276 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 TMEM252Q8N6L7 170 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 OR4B1Q8NGF8 309 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 MARVELD1Q9BSK0 173 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 SLC35B3Q9H1N7 401 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
SPG11-216ENST00000559347 EPPK1P58107 5090 aaKnown RBP7.91□□□□□ -1.14
SPG11-216ENST00000559347 ZNF705FA8MVS1 300 aaPredicted RBP7.9□□□□□ -1.14
SPG11-216ENST00000559347 INMT-MINDY4F8WBC2 141 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 COX7A2P2O60397 106 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 SIX6O95475 246 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 ZNF705DP0CH99 300 aaPredicted RBP7.9□□□□□ -1.14
SPG11-216ENST00000559347 ZNF705BP0CI00 300 aaPredicted RBP7.9□□□□□ -1.14
SPG11-216ENST00000559347 CAMLGP49069 296 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 FXYD7P58549 80 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 DEFA1P59665 94 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 DEFA3P59666 94 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 FGL1Q08830 312 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
SPG11-216ENST00000559347 IGFL4Q6B9Z1 124 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 AMTNQ6UX39 209 aa7.9□□□□□ -1.14
SPG11-216ENST00000559347 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms