RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZNF124Q15973 351 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 ATP6V1FQ16864 119 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 LRRC37A5PQ49AS3 106 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 SPATA31B1PQ5VZV4 182 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 EBLN2Q6P2I7 272 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 FAM24BQ8N5W8 94 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 TMEM252Q8N6L7 170 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 OR11H2Q8NH07 326 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 RSG1Q9BU20 258 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 SLC25A39Q9BZJ4 359 aaPredicted RBP3.22□□□□□ -1.89
SNX1-205ENST00000559339 NMES1Q9C002 83 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 MFFQ9GZY8 342 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 SLC25A31Q9H0C2 315 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 ARL6Q9H0F7 186 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 ARV1Q9H2C2 271 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 RPRMQ9NS64 109 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 UQCC1Q9NVA1 299 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 DOK5Q9P104 306 aa3.22□□□□□ -1.89
SNX1-205ENST00000559339 CXorf65A6NEN9 183 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 NUPR2A6NF83 97 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 FAM24AA6NFZ4 105 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 KNCNA6PVL3 124 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 H3BMM0 161 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 COX7A2P2O60397 106 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 MPDU1O75352 247 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 CCNKO75909 580 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 JTBO76095 146 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 PTTG1O95997 202 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 HLA-DRB4P13762 266 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 MIFP14174 115 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 B2MP61769 119 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 IFITM3Q01628 133 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 BAXQ07812 192 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 FGL1Q08830 312 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 C10orf113Q5VZT2 155 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 ZFAND6Q6FIF0 208 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 TMEM182Q6ZP80 229 aaPredicted RBP3.21□□□□□ -1.9
SNX1-205ENST00000559339 FOXI2Q6ZQN5 318 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 LINC00305Q7Z4B0 112 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 TRPT1Q86TN4 253 aaKnown RBP3.21□□□□□ -1.9
SNX1-205ENST00000559339 BPIFA4PQ86YQ2 179 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 ZNF709Q8N972 641 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 OR4B1Q8NGF8 309 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 OR1L4Q8NGR5 311 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 UHRF2Q96PU4 802 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 PFDN5Q99471 154 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 SHANK2-AS3Q9BTD1 123 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 SAV1Q9H4B6 383 aaPredicted RBP3.21□□□□□ -1.9
SNX1-205ENST00000559339 DNAJC4Q9NNZ3 241 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 KCNIP2Q9NS61 270 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 HLA-DRB4X5D2U9 266 aa3.21□□□□□ -1.9
SNX1-205ENST00000559339 UBE2L5PA0A1B0GUS4 154 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 TMEM238LA0A1B0GVL6 79 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 C17orf112F2Z3M2 114 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 H3BRN7 92 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 SOCS3O14543 225 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 EIF4EBP3O60516 100 aaPredicted RBP3.2□□□□□ -1.9
SNX1-205ENST00000559339 SIX6O95475 246 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 IGKV3-20P01619 116 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 CXCL2P19875 107 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 FGF7P21781 194 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 RPL29P47914 159 aaKnown RBP3.2□□□□□ -1.9
SNX1-205ENST00000559339 H2BFSP57053 126 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 ARL16Q0P5N6 197 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 IL15RAQ13261 267 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 GUK1Q16774 197 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 VWC2Q2TAL6 325 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 LCN15Q6UWW0 184 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 ZNF738Q8NE65 137 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 OR5C1Q8NGR4 320 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 C11orf45Q8TAV5 145 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 THAP6Q8TBB0 222 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 CHAC2Q8WUX2 184 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 PPP1R1CQ8WVI7 109 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 CLUHP3Q96NS8 147 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 MGST2Q99735 147 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 SCRT1Q9BWW7 348 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 SLC25A32Q9H2D1 315 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 C11orf68Q9H3H3 251 aaKnown RBP3.2□□□□□ -1.9
SNX1-205ENST00000559339 PPP1R14DQ9NXH3 145 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 CLEC5AQ9NY25 188 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 XCL2Q9UBD3 114 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 WDR83OSQ9Y284 106 aa3.2□□□□□ -1.9
SNX1-205ENST00000559339 KLK5Q9Y337 293 aaPredicted RBP3.2□□□□□ -1.9
SNX1-205ENST00000559339 IGHV3OR16-12A0A075B7B8 117 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 A0A0J9YX75 114 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 IGSF23A1L1A6 192 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 TMEM189A5PLL7 270 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 SMIM9A6NGZ8 99 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 ZNF705EA8MWA4 302 aaPredicted RBP3.19□□□□□ -1.9
SNX1-205ENST00000559339 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 DUSP14O95147 198 aaKnown RBP3.19□□□□□ -1.9
SNX1-205ENST00000559339 MPC2O95563 127 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 IFNA5P01569 189 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 AMBPP02760 352 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 CXCL3P19876 107 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 C4BPBP20851 252 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 LORP23490 312 aaPredicted RBP3.19□□□□□ -1.9
SNX1-205ENST00000559339 RHOBP62745 196 aa3.19□□□□□ -1.9
SNX1-205ENST00000559339 PSG9Q00887 426 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms