RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FABP1P07148 127 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 HTN3P15516 51 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 CNN1P51911 297 aaKnown RBP9.6□□□□□ -0.87
VPS18-203ENST00000558855 RRAS2P62070 204 aaPredicted RBP9.6□□□□□ -0.87
VPS18-203ENST00000558855 SPINK13Q1W4C9 94 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 PATE2Q6UY27 113 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 CYP2G1PQ6ZSU1 146 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 TMEM144Q7Z5S9 345 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 BAP18Q8IXM2 172 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 OR11H7Q8NGC8 314 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 CIB3Q96Q77 187 aaPredicted RBP9.6□□□□□ -0.87
VPS18-203ENST00000558855 NDUFAF3Q9BU61 184 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 SLC25A39Q9BZJ4 359 aaPredicted RBP9.6□□□□□ -0.87
VPS18-203ENST00000558855 RPRMQ9NS64 109 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 RCL1Q9Y2P8 373 aaKnown RBP9.6□□□□□ -0.87
VPS18-203ENST00000558855 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
VPS18-203ENST00000558855 IGLV2-18A0A075B6J9 118 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 PLAC8L1A1L4L8 177 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 SMCO3A2RU48 225 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 SMIM9A6NGZ8 99 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 ZNF705GA8MUZ8 300 aaPredicted RBP9.59□□□□□ -0.87
VPS18-203ENST00000558855 MRPS12O15235 138 aaKnown RBP9.59□□□□□ -0.87
VPS18-203ENST00000558855 SNRPCP09234 159 aaKnown RBP9.59□□□□□ -0.87
VPS18-203ENST00000558855 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 S100A5P33763 92 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 GALR1P47211 349 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 EBLN2Q6P2I7 272 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 BPIFCQ8NFQ6 507 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 SHANK2-AS3Q9BTD1 123 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 PSENENQ9NZ42 101 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 SLC45A2Q9UMX9 530 aa9.59□□□□□ -0.87
VPS18-203ENST00000558855 TRAV12-2A0A075B6T6 113 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 OR4E1P0C645 316 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 LINC00869P0C866 280 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 AZU1P20160 251 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 FGL1Q08830 312 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 SLC38A11Q08AI6 406 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 TMEM14EPQ6UXP3 125 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 DEDD2Q8WXF8 326 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 IGF2BP2-AS1Q96M15 143 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 PFDN2Q9UHV9 154 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
VPS18-203ENST00000558855 TMEM189A5PLL7 270 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 CCSO14618 274 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 HBE1P02100 147 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 P0DMU3 169 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 MEOX2P50222 304 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 PLP1P60201 277 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 SPATA31B1PQ5VZV4 182 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 TMEM88Q6PEY1 159 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 C7orf50Q9BRJ6 194 aaKnown RBP9.57□□□□□ -0.88
VPS18-203ENST00000558855 HSPG2P98160 4391 aa9.57□□□□□ -0.88
VPS18-203ENST00000558855 PLA2G10O15496 165 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 SCGB1D2O95969 90 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
VPS18-203ENST00000558855 IL5P05113 134 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 IL7P13232 177 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 RPP30P78346 268 aaKnown RBP9.56□□□□□ -0.88
VPS18-203ENST00000558855 KIR3DS1Q14943 382 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 FCN2Q15485 313 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 RRN3P1Q2M238 152 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 SPANXN2Q5MJ10 180 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 Q6ZR54 194 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 ZBTB8BQ8NAP8 495 aaPredicted RBP9.56□□□□□ -0.88
VPS18-203ENST00000558855 SMIM8Q96KF7 97 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
VPS18-203ENST00000558855 HIGD1AQ9Y241 93 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
VPS18-203ENST00000558855 PIGBOS1A0A0B4J2F0 54 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 H3BTX0 84 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 OR5G3P0C626 314 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 CXCL3P19876 107 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 DLK1P80370 383 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 IAH1Q2TAA2 248 aaPredicted RBP9.55□□□□□ -0.88
VPS18-203ENST00000558855 TRIQKQ629K1 86 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 ZNF738Q8NE65 137 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 ARL6Q9H0F7 186 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 C11orf1Q9H5F2 150 aa9.55□□□□□ -0.88
VPS18-203ENST00000558855 A0A087X0K7 114 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 NAP1L6A6NFF2 107 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 SLC17A3O00476 420 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 HYPMO75409 117 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 MBPP02686 304 aaPredicted RBP9.54□□□□□ -0.88
VPS18-203ENST00000558855 DAD1P61803 113 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 HIST1H1AQ02539 215 aaPredicted RBP9.54□□□□□ -0.88
VPS18-203ENST00000558855 OXA1LQ15070 435 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 C4orf46Q504U0 113 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 OR8A1Q8NGG7 326 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 GPR82Q96P67 336 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 DNAH5Q8TE73 4624 aa9.54□□□□□ -0.88
VPS18-203ENST00000558855 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms