RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SMIM20Q8N5G0 67 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 ZNF714Q96N38 554 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 SS18L2Q9UHA2 77 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 HEATR5BQ9P2D3 2071 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 NCAPD3P42695 1498 aa1.42□□□□□ -2.18
CASC4-206ENST00000558847 DENND4CQ5VZ89 1909 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 MFSD11O43934 449 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 CRHP06850 196 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 ROMO1P60602 79 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 MPV17LQ2QL34 196 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.41□□□□□ -2.18
CASC4-206ENST00000558847 OR5D16Q8NGK9 328 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 OR5D14Q8NGL3 314 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 ODF3Q96PU9 254 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 GPX7Q96SL4 187 aaPredicted RBP1.41□□□□□ -2.18
CASC4-206ENST00000558847 HOPXQ9BPY8 73 aaPredicted RBP1.41□□□□□ -2.18
CASC4-206ENST00000558847 MAP1LC3BQ9GZQ8 125 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 ATPIF1Q9UII2 106 aa1.41□□□□□ -2.18
CASC4-206ENST00000558847 OBSL1O75147 1896 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 E7EUB6 86 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 G0S2P27469 103 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 RAB5CP51148 216 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 DEFB115Q30KQ5 88 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 GDF5OSQ5U4N7 250 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 FAM24BQ8N5W8 94 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 CENPHQ9H3R5 247 aa1.4□□□□□ -2.19
CASC4-206ENST00000558847 CACYBPQ9HB71 228 aaKnown RBP1.4□□□□□ -2.19
CASC4-206ENST00000558847 CHCHD2Q9Y6H1 151 aaPredicted RBP1.4□□□□□ -2.19
CASC4-206ENST00000558847 MYOFQ9NZM1 2061 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 ADGRB2O60241 1585 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 CAMSAP2Q08AD1 1489 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 GPR31O00270 319 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 CCL16O15467 120 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 HIST1H2BKO60814 126 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 HIST1H2BJP06899 126 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 CRYBA4P53673 196 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 C1orf140Q5VVS0 124 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 OR4K15Q8NH41 348 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 MUCL1Q96DR8 90 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 CDC42SE1Q9NRR8 79 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 ORMDL1Q9P0S3 153 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 MICAL3Q7RTP6 2002 aa1.39□□□□□ -2.19
CASC4-206ENST00000558847 A0A087WSZ3 146 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 TRAV10A0A0B4J240 114 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 H3BQV1 296 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 M0R233 179 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 ERC2-IT1O76042 136 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 INSL3P51460 131 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 TMBIM6P55061 237 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 CDK6Q00534 326 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 RTL8BQ17RB0 113 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 PATE1Q8WXA2 126 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 BORCS5Q969J3 196 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 ISOC1Q96CN7 298 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 PCBD2Q9H0N5 130 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 OR52A1Q9UKL2 312 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 ZFP30Q9Y2G7 519 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 SYNMO15061 1565 aa1.38□□□□□ -2.19
CASC4-206ENST00000558847 LAMB2P55268 1798 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 TRAV27A0A087WT01 109 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 CST7O76096 145 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 ARPP19P56211 112 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 KLRD1Q13241 179 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 PATE2Q6UY27 113 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 PHF5AQ7RTV0 110 aaKnown RBP1.37□□□□□ -2.19
CASC4-206ENST00000558847 CHCHD1Q96BP2 118 aaKnown RBP1.37□□□□□ -2.19
CASC4-206ENST00000558847 OR2H1Q9GZK4 316 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 MED11Q9P086 117 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 NUBP2Q9Y5Y2 271 aa1.37□□□□□ -2.19
CASC4-206ENST00000558847 TRBV6-4A0A1B0GX49 114 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 MAP1LC3B2A6NCE7 125 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 RER1O15258 196 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 LYRM1O43325 122 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 NUPR1O60356 82 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 CSN2P05814 226 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 GLRXP35754 106 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 FKBP1CQ5VVH2 108 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 DCUN1D2Q6PH85 259 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 ZNF833PQ6ZTB9 187 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 DYDC1Q8WWB3 177 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 CEP164Q9UPV0 1460 aa1.36□□□□□ -2.19
CASC4-206ENST00000558847 ARHGEF11O15085 1522 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 IGLV3-32A0A0A0MS00 114 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 OR2T8A6NH00 312 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 FABP1P07148 127 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 CXCL1P09341 107 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 RPL35P42766 123 aaKnown RBP1.35□□□□□ -2.19
CASC4-206ENST00000558847 HBBP68871 147 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 LTC4SQ16873 150 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 RAB37Q96AX2 223 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 HYLS1Q96M11 299 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 OBSCN-AS1Q96MR7 158 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 SELENOSQ9BQE4 189 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 CCDC32Q9BV29 185 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 TMEM14CQ9P0S9 112 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 LAMTOR2Q9Y2Q5 125 aa1.35□□□□□ -2.19
CASC4-206ENST00000558847 HELZ2Q9BYK8 2649 aaKnown RBP1.34□□□□□ -2.19
CASC4-206ENST00000558847 IGHV1-58A0A0C4DH39 117 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms