RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MORN5Q5VZ52 161 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 DOCK9Q9BZ29 2069 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 THADAQ6YHU6 1953 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 C1orf159Q96HA4 380 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 SS18L2Q9UHA2 77 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 IFITM1P13164 125 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 ASPHD1Q5U4P2 390 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 IGLV3-21P80748 117 aaPredicted RBP11.43□□□□□ -0.58
SPG11-210ENST00000558319 SEC16AO15027 2179 aa11.43□□□□□ -0.58
SPG11-210ENST00000558319 IGHV2-26A0A0B4J1V2 119 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 ZNF114Q8NC26 417 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 LINC00479Q96M42 142 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 RTTNQ86VV8 2226 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 C5orf63A6NC05 138 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 TRACP01848 142 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 Q0VFX4 171 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 COL8A2P25067 703 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 LYPD2Q6UXB3 125 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 LINC00114Q6XXX2 140 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 RASL10AQ92737 203 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 DUSP14O95147 198 aaKnown RBP11.42□□□□□ -0.58
SPG11-210ENST00000558319 MST1P26927 711 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 A0A0G2JNJ9 132 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 CGB3P0DN86 165 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 Q9UFV3 132 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 PATJQ8NI35 1801 aa11.42□□□□□ -0.58
SPG11-210ENST00000558319 CSRP3P50461 194 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 KLHDC3Q9BQ90 382 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 LINC00271P0C7V0 271 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 IGFBPL1Q8WX77 278 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 SRRM4A7MD48 611 aaKnown RBP11.41□□□□□ -0.58
SPG11-210ENST00000558319 MLANAQ16655 118 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 PRIMA1Q86XR5 153 aa11.41□□□□□ -0.58
SPG11-210ENST00000558319 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
SPG11-210ENST00000558319 DIDO1Q9BTC0 2240 aaKnown RBP11.41□□□□□ -0.58
SPG11-210ENST00000558319 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 RNF144BQ7Z419 303 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 A0A1B0GW64 132 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 AZU1P20160 251 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 ETDBQ3ZM63 59 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 J3QRE1 110 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 NTF4P34130 210 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 CLPSL2Q6UWE3 100 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 BRWD3Q6RI45 1802 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 PI4KAP42356 2102 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
SPG11-210ENST00000558319 IGKV1-12A0A0C4DH73 117 aa11.4□□□□□ -0.59
SPG11-210ENST00000558319 IGKV1D-12P01611 117 aa11.4□□□□□ -0.59
SPG11-210ENST00000558319 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.59
SPG11-210ENST00000558319 C9orf118A6NHY6 69 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 OVOL1O14753 267 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 PARP14Q460N5 1801 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 J3QW42 95 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 CD59P13987 128 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 F8WEM9 126 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 MRPL27Q9P0M9 148 aaKnown RBP11.39□□□□□ -0.59
SPG11-210ENST00000558319 PSME4Q14997 1843 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 K7ERJ3 54 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 VCYO14598 125 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 IFI6P09912 130 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 SCN5AQ14524 2016 aa11.39□□□□□ -0.59
SPG11-210ENST00000558319 K7EP13 123 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 FAM166AQ6J272 317 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 CFHR1Q03591 330 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 BPESC1Q9GZL8 116 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 TMEM126AQ9H061 195 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 MYMXA0A1B0GTQ4 84 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 C9JQL5 133 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 CFHR2P36980 270 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 HAMPP81172 84 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 RBMY1FQ15415 496 aaKnown RBP11.38□□□□□ -0.59
SPG11-210ENST00000558319 ANXA2RQ3ZCQ2 193 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
SPG11-210ENST00000558319 DOCK11Q5JSL3 2073 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 PRB2P02812 416 aaPredicted RBP11.38□□□□□ -0.59
SPG11-210ENST00000558319 SSC4DQ8WTU2 575 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
SPG11-210ENST00000558319 TMEM213A2RRL7 107 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 SOCS3O14543 225 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 DKK1O94907 266 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 HOXD3P31249 432 aaPredicted RBP11.37□□□□□ -0.59
SPG11-210ENST00000558319 CD177Q8N6Q3 437 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 TET1Q8NFU7 2136 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 POLEQ07864 2286 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 ALPK2Q86TB3 2170 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 IGKV1-5P01602 117 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 CLPSP04118 112 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 TRAV1-1A0A0B4J248 108 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms