RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 LINC00305Q7Z4B0 112 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 SCGB1C1Q8TD33 95 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 DCANP1Q8TF63 244 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 PFDN5Q99471 154 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 SHANK2-AS3Q9BTD1 123 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 CSTL1Q9H114 145 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 C11orf1Q9H5F2 150 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 KCNIP2Q9NS61 270 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 WDR83OSQ9Y284 106 aa6.65□□□□□ -1.34
SPG11-207ENST00000558138 ELOA3CA0A087WX78 387 aaPredicted RBP6.64□□□□□ -1.35
SPG11-207ENST00000558138 KIR2DL5BA0A0G2JN68 375 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 KIR2DL5BA0A0G2JPC4 375 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 H0YIZ8 118 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 SPRY2O43597 315 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 IGKV3-20P01619 116 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 CXCL3P19876 107 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 PSMB3P49720 205 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 NUTF2P61970 127 aaKnown RBP6.64□□□□□ -1.35
SPG11-207ENST00000558138 KIR2DL5AQ8N109 375 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 KIR2DL5BQ8NHK3 375 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 ATP5SQ99766 215 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 NPCDR1Q9BY65 106 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 SLC39A9Q9NUM3 307 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 PXMP4Q9Y6I8 212 aa6.64□□□□□ -1.35
SPG11-207ENST00000558138 ISLRO14498 428 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 RPL29P47914 159 aaKnown RBP6.63□□□□□ -1.35
SPG11-207ENST00000558138 PLP1P60201 277 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 OPCMLQ14982 345 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 VWC2Q2TAL6 325 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 MORN3Q6PF18 240 aaPredicted RBP6.63□□□□□ -1.35
SPG11-207ENST00000558138 Q6ZWC4 215 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 BPIFA4PQ86YQ2 179 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 ZNF738Q8NE65 137 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 OR11H7Q8NGC8 314 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 OR4B1Q8NGF8 309 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 DNAJC4Q9NNZ3 241 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 RPRMQ9NS64 109 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 PPP1R14DQ9NXH3 145 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 HSPB11Q9Y547 144 aa6.63□□□□□ -1.35
SPG11-207ENST00000558138 FXYD6-FXYD2A0A087WZ82 144 aa6.62□□□□□ -1.35
SPG11-207ENST00000558138 SNRPCP09234 159 aaKnown RBP6.62□□□□□ -1.35
SPG11-207ENST00000558138 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
SPG11-207ENST00000558138 SPP1P10451 314 aa6.62□□□□□ -1.35
SPG11-207ENST00000558138 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.62□□□□□ -1.35
SPG11-207ENST00000558138 INO80EQ8NBZ0 244 aaPredicted RBP6.62□□□□□ -1.35
SPG11-207ENST00000558138 OVOL2Q9BRP0 275 aa6.62□□□□□ -1.35
SPG11-207ENST00000558138 WDR61Q9GZS3 305 aaKnown RBP6.62□□□□□ -1.35
SPG11-207ENST00000558138 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
SPG11-207ENST00000558138 H3BTX0 84 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 LYL1P12980 280 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 FXYD7P58549 80 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 OXA1LQ15070 435 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 TMEM41BQ5BJD5 291 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 FAM78BQ5VT40 261 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 IGFL4Q6B9Z1 124 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 LCN15Q6UWW0 184 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 PATE2Q6UY27 113 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 FOXI2Q6ZQN5 318 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 TRPT1Q86TN4 253 aaKnown RBP6.61□□□□□ -1.35
SPG11-207ENST00000558138 RNF182Q8N6D2 247 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 OR11H2Q8NH07 326 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 MUC7Q8TAX7 377 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 ASB13Q8WXK3 278 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 TMEM37Q8WXS4 190 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 RNF183Q96D59 192 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 RARRES2Q99969 163 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 RNF126Q9BV68 326 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 C1QTNF4Q9BXJ3 329 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 SAV1Q9H4B6 383 aaPredicted RBP6.61□□□□□ -1.35
SPG11-207ENST00000558138 CLEC5AQ9NY25 188 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 TP53TG1Q9Y2A0 90 aa6.61□□□□□ -1.35
SPG11-207ENST00000558138 TRAV5A0A0B4J249 113 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 F6UB75 175 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 SOCS3O14543 225 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 HLA-DRB4P13762 266 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 DEFB1P60022 68 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 RHOBP62745 196 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 PRR20EP86478 221 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 PRR20CP86479 221 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 PRR20DP86480 221 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 PRR20BP86481 221 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 PRR20AP86496 221 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 HIST1H1AQ02539 215 aaPredicted RBP6.6□□□□□ -1.35
SPG11-207ENST00000558138 ZNF266Q14584 549 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 FFAR4Q5NUL3 377 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 SPATA31B1PQ5VZV4 182 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 ZFAND6Q6FIF0 208 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 OR2T35Q8NGX2 323 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 IL17DQ8TAD2 202 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 SLC50A1Q9BRV3 221 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 MFFQ9GZY8 342 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 TIMM9Q9Y5J7 89 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 HLA-DRB4X5D2U9 266 aa6.6□□□□□ -1.35
SPG11-207ENST00000558138 COL7A1Q02388 2944 aa6.59□□□□□ -1.35
SPG11-207ENST00000558138 IGHV3OR16-12A0A075B7B8 117 aa6.59□□□□□ -1.35
SPG11-207ENST00000558138 A0A087X0K7 114 aa6.59□□□□□ -1.35
SPG11-207ENST00000558138 A0A0J9YWU9 116 aa6.59□□□□□ -1.35
SPG11-207ENST00000558138 H3BMM0 161 aa6.59□□□□□ -1.35
SPG11-207ENST00000558138 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms