RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 UNQ9165/PRO28630Q6UXU0 137 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 C17orf77Q96MU5 243 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 NIPSNAP3BQ9BS92 247 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 ZNF586Q9NXT0 402 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 IGHV3-49A0A0A0MS15 119 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 SCGB2A2Q13296 93 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 BTN1A1Q13410 526 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 ATP6V0BQ99437 205 aa15.71■□□□□ 0.11
SNRPA1-205ENST00000558036 A0A1W2PRE2 83 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 APOHP02749 345 aaPredicted RBP15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 HIST2H2BDQ6DRA6 164 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 BPIFA4PQ86YQ2 179 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 FOXE3Q13461 319 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 TXNDC17Q9BRA2 123 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 ELOVL1Q9BW60 279 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 TMEM14CQ9P0S9 112 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 ARL2-SNX15V9GYD0 113 aa15.7■□□□□ 0.1
SNRPA1-205ENST00000558036 F6UZH7 168 aa15.69■□□□□ 0.1
SNRPA1-205ENST00000558036 CLDN34H7C241 214 aa15.69■□□□□ 0.1
SNRPA1-205ENST00000558036 CRYBB3P26998 211 aa15.69■□□□□ 0.1
SNRPA1-205ENST00000558036 ZNF418Q8TF45 676 aaPredicted RBP15.69■□□□□ 0.1
SNRPA1-205ENST00000558036 TMEM89A2RUT3 159 aa15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 MRPS12O15235 138 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 TMEM88Q6PEY1 159 aa15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 KLHDC1Q8N7A1 406 aa15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 IGLC2P0DOY2 106 aa15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 PEF1Q9UBV8 284 aaKnown RBP15.68■□□□□ 0.1
SNRPA1-205ENST00000558036 SETD2Q9BYW2 2564 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 RNASE1P07998 156 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 ELANEP08246 267 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 PRB4P10163 310 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 HIST1H1EP10412 219 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 HILS1P60008 231 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 FAM74A3Q4VXF1 159 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 S100A7AQ86SG5 101 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 OR8I2Q8N0Y5 310 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 OR4F17Q8NGA8 305 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 TVP23CQ96ET8 276 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 ZNF320A2RRD8 509 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 RPS10P5Q9NQ39 176 aa15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 AURKAIP1Q9NWT8 199 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-205ENST00000558036 TRBV20OR9-2A0A075B6H5 130 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 C7orf77A4D0Y5 90 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 PGPEP1LA6NFU8 196 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 SLC17A3O00476 420 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 CRYBA1P05813 215 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 GNG5P63218 68 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 CBLN2Q8IUK8 224 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 EXOC3-AS1Q8N2X6 119 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 METTL26Q96S19 204 aa15.66■□□□□ 0.1
SNRPA1-205ENST00000558036 PGPA6NDG6 321 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 BUB3O43684 328 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 MYCNOSP40205 109 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 C18orf65Q6ZTR6 163 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 MYOZ3Q8TDC0 251 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 C11orf52Q96A22 123 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 Q9H3A6 140 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 TRBV19A0A075B6N1 114 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 NDUFA4O00483 81 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 GGCTO75223 188 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 NDUFS6O75380 124 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 RPL35P42766 123 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 SRSF2Q01130 221 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 TMEM241Q24JQ0 296 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 TCTEX1D4Q5JR98 221 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 LINC00479Q96M42 142 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 SDF2L1Q9HCN8 221 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 RPH3ALQ9UNE2 315 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 SMAD5-AS1Q9Y6J3 95 aa15.65■□□□□ 0.1
SNRPA1-205ENST00000558036 FAM209BQ5JX69 171 aa15.64■□□□□ 0.09
SNRPA1-205ENST00000558036 RNF152Q8N8N0 203 aa15.64■□□□□ 0.09
SNRPA1-205ENST00000558036 FN1P02751 2386 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-205ENST00000558036 FOSL1P15407 271 aa15.64■□□□□ 0.09
SNRPA1-205ENST00000558036 ADIRFQ15847 76 aa15.64■□□□□ 0.09
SNRPA1-205ENST00000558036 NAT8Q9UHE5 227 aa15.64■□□□□ 0.09
SNRPA1-205ENST00000558036 SLC25A5P05141 298 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-205ENST00000558036 RPL7P18124 248 aaKnown RBP15.63■□□□□ 0.09
SNRPA1-205ENST00000558036 C2CD4CQ8TF44 421 aa15.63■□□□□ 0.09
SNRPA1-205ENST00000558036 DNASE2O00115 360 aaPredicted RBP15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 C11orf44Q8N8P7 122 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 UBE2E2Q96LR5 201 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 LGALS1P09382 135 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 EDN2P20800 178 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 RPL23P62829 140 aaKnown RBP15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 DEFB136Q30KP8 78 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 KHDC1LQ5JSQ8 128 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 TMEM190Q8WZ59 177 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 SELENOKQ9Y6D0 94 aa15.62■□□□□ 0.09
SNRPA1-205ENST00000558036 TM4SF20Q53R12 229 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 SIGLEC15Q6ZMC9 328 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 SGK494Q96LW2 274 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 NIPBLQ6KC79 2804 aaeCLIP15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 TRAV34A0A0B4J273 112 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 HELTA6NFD8 242 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 CYSRT1A8MQ03 144 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 PEX7O00628 323 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 RHEBQ15382 184 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 LINC01006Q8NI28 216 aa15.61■□□□□ 0.09
SNRPA1-205ENST00000558036 EPDR1Q9UM22 224 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms