RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 C22orf15Q8WYQ4 148 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 HIGD1AQ9Y241 93 aa10.22□□□□□ -0.77
LDLR-207ENST00000558013 I3L2K1 104 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 P01737 135 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 RPLP1P05386 114 aaKnown RBP10.21□□□□□ -0.77
LDLR-207ENST00000558013 CD3EP07766 207 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 IGLC2P0DOY2 106 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 IGLC3P0DOY3 106 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 PRSS22Q9GZN4 317 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 LPAR2Q9HBW0 351 aa10.21□□□□□ -0.77
LDLR-207ENST00000558013 IGLV2-11P01706 119 aa10.21□□□□□ -0.78
LDLR-207ENST00000558013 STXBP6Q8NFX7 210 aa10.21□□□□□ -0.78
LDLR-207ENST00000558013 C19orf71A6NCJ1 209 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 TOMM40O96008 361 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 Q6ZN92 141 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 STPG4Q8N801 248 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 TXN2Q99757 166 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 C2orf70A6NJV1 201 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 B9A039 149 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 M0R3E3 92 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 HBBP68871 147 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 OR8B2Q96RD0 313 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 RASL11BQ9BPW5 248 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 NGBQ9NPG2 151 aa10.2□□□□□ -0.78
LDLR-207ENST00000558013 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
LDLR-207ENST00000558013 TIMM8BQ9Y5J9 83 aaPredicted RBP10.2□□□□□ -0.78
LDLR-207ENST00000558013 K7EIM0 57 aa10.19□□□□□ -0.78
LDLR-207ENST00000558013 ZNF672Q499Z4 452 aaPredicted RBP10.19□□□□□ -0.78
LDLR-207ENST00000558013 COL8A1P27658 744 aa10.19□□□□□ -0.78
LDLR-207ENST00000558013 Q86TA4 180 aa10.19□□□□□ -0.78
LDLR-207ENST00000558013 OR2J3O76001 311 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 IGHV3-23P01764 117 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 DAZAP1Q96EP5 407 aaKnown RBP10.18□□□□□ -0.78
LDLR-207ENST00000558013 FMC1Q96HJ9 113 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 SCNM1Q9BWG6 230 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 IGHV3OR16-8A0A075B7F1 116 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 A8MWL6 223 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 CSN3P07498 182 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 CA7P43166 264 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 KLF5Q13887 457 aaPredicted RBP10.18□□□□□ -0.78
LDLR-207ENST00000558013 RASL11AQ6T310 242 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 ZC2HC1AQ96GY0 325 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 LY6LH3BQJ8 138 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 IGLL1P15814 213 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 FAM120AOSQ5T036 256 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
LDLR-207ENST00000558013 H0Y8G0 127 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 OVOL3O00110 214 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 PLP1P60201 277 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 MUC21A0A0G2JKD1 596 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 MUC21A0A140T8X8 626 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 M0QZK8 103 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 IL4P05112 153 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 HINT1P49773 126 aaPredicted RBP10.17□□□□□ -0.78
LDLR-207ENST00000558013 HES1Q14469 280 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 MUC21Q5SSG8 566 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 OR8B3Q8NGG8 313 aa10.17□□□□□ -0.78
LDLR-207ENST00000558013 DLEU1O43261 78 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 FCGR2BP31994 310 aaPredicted RBP10.16□□□□□ -0.78
LDLR-207ENST00000558013 TNFRSF14Q92956 283 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 UQCR10Q9UDW1 63 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 IGHV1-24A0A0C4DH33 117 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 IGHV3-35A0A0C4DH35 117 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 ARMS2P0C7Q2 107 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 BTF3P20290 206 aaKnown RBP10.16□□□□□ -0.78
LDLR-207ENST00000558013 CRIP1P50238 77 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
LDLR-207ENST00000558013 RBPMS2Q6ZRY4 209 aaKnown RBP10.16□□□□□ -0.78
LDLR-207ENST00000558013 RBM14Q96PK6 669 aaKnown RBP10.16□□□□□ -0.78
LDLR-207ENST00000558013 PMCHL2Q9BQD1 86 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 ITPR1Q14643 2758 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 RBPJQ06330 500 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 ATP5L2Q7Z4Y8 100 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 DYNAPQ8N1N2 210 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 ZNF491Q8N8L2 437 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 VKORC1Q9BQB6 163 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 OTORQ9NRC9 128 aa10.16□□□□□ -0.78
LDLR-207ENST00000558013 TRBV19A0A075B6N1 114 aa10.15□□□□□ -0.78
LDLR-207ENST00000558013 NDUFB8O95169 186 aa10.15□□□□□ -0.78
LDLR-207ENST00000558013 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.78
LDLR-207ENST00000558013 LAMTOR2Q9Y2Q5 125 aa10.15□□□□□ -0.78
LDLR-207ENST00000558013 TMSB15BA0A087X1C1 80 aa10.15□□□□□ -0.79
LDLR-207ENST00000558013 APOHP02749 345 aaPredicted RBP10.15□□□□□ -0.79
LDLR-207ENST00000558013 TSPOP30536 169 aa10.15□□□□□ -0.79
LDLR-207ENST00000558013 NDPQ00604 133 aa10.15□□□□□ -0.79
LDLR-207ENST00000558013 C8orf49Q96NF6 230 aa10.15□□□□□ -0.79
LDLR-207ENST00000558013 CELSR2Q9HCU4 2923 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 hDV102S1A0JD36 115 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 SIGLEC15Q6ZMC9 328 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 GOLT1BQ9Y3E0 138 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 K7ENP7 123 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 CCL21O00585 134 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 CHEK1O14757 476 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 HTR1DP28221 377 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 SHANK2-AS3Q9BTD1 123 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 ZNF492Q9P255 531 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 HIVEP3Q5T1R4 2406 aa10.14□□□□□ -0.79
LDLR-207ENST00000558013 LOC102724200A0A096LPH7 203 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms