RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 STXBP6Q8NFX7 210 aa15.98■□□□□ 0.15
CASC4-204ENST00000557945 GNPNAT1Q96EK6 184 aaPredicted RBP15.98■□□□□ 0.15
CASC4-204ENST00000557945 SPAG8Q99932 426 aaPredicted RBP15.98■□□□□ 0.15
CASC4-204ENST00000557945 SH3BGRL3Q9H299 93 aa15.98■□□□□ 0.15
CASC4-204ENST00000557945 SLC25A32Q9H2D1 315 aa15.98■□□□□ 0.15
CASC4-204ENST00000557945 RNF24Q9Y225 148 aa15.98■□□□□ 0.15
CASC4-204ENST00000557945 DNASE2O00115 360 aaPredicted RBP15.97■□□□□ 0.15
CASC4-204ENST00000557945 PSMG3Q9BT73 122 aaPredicted RBP15.97■□□□□ 0.15
CASC4-204ENST00000557945 MS4A6AQ9H2W1 248 aa15.97■□□□□ 0.15
CASC4-204ENST00000557945 ACOT6Q3I5F7 207 aaPredicted RBP15.96■□□□□ 0.15
CASC4-204ENST00000557945 FAM78BQ5VT40 261 aa15.96■□□□□ 0.15
CASC4-204ENST00000557945 MORN5Q5VZ52 161 aa15.96■□□□□ 0.15
CASC4-204ENST00000557945 OR4C46A6NHA9 309 aa15.95■□□□□ 0.14
CASC4-204ENST00000557945 RPL7P18124 248 aaKnown RBP15.95■□□□□ 0.14
CASC4-204ENST00000557945 GALR1P47211 349 aa15.95■□□□□ 0.14
CASC4-204ENST00000557945 GTSCR1Q86UQ5 136 aa15.95■□□□□ 0.14
CASC4-204ENST00000557945 GPR82Q96P67 336 aa15.95■□□□□ 0.14
CASC4-204ENST00000557945 NBEAL1Q6ZS30 2694 aa15.94■□□□□ 0.14
CASC4-204ENST00000557945 TRAV5A0A0B4J249 113 aa15.94■□□□□ 0.14
CASC4-204ENST00000557945 NKX2-5P52952 324 aaPredicted RBP15.94■□□□□ 0.14
CASC4-204ENST00000557945 C9orf62Q8N4C0 152 aa15.94■□□□□ 0.14
CASC4-204ENST00000557945 OR2G3Q8NGZ4 309 aa15.94■□□□□ 0.14
CASC4-204ENST00000557945 M6PRP20645 277 aa15.93■□□□□ 0.14
CASC4-204ENST00000557945 CD81P60033 236 aa15.93■□□□□ 0.14
CASC4-204ENST00000557945 RAB2AP61019 212 aa15.93■□□□□ 0.14
CASC4-204ENST00000557945 EIF5AP63241 154 aaKnown RBP15.93■□□□□ 0.14
CASC4-204ENST00000557945 SERF2P84101 59 aa15.93■□□□□ 0.14
CASC4-204ENST00000557945 SPATA31B1PQ5VZV4 182 aa15.93■□□□□ 0.14
CASC4-204ENST00000557945 SEPSECSQ9HD40 501 aaKnown RBP15.93■□□□□ 0.14
CASC4-204ENST00000557945 NRN1Q9NPD7 142 aa15.93■□□□□ 0.14
CASC4-204ENST00000557945 AURKAIP1Q9NWT8 199 aaPredicted RBP15.93■□□□□ 0.14
CASC4-204ENST00000557945 ATF4P18848 351 aaPredicted RBP15.92■□□□□ 0.14
CASC4-204ENST00000557945 RHOBP62745 196 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 MIR17HGQ75NE6 70 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 OR10G4Q8NGN3 311 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 OR10G9Q8NGN4 311 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 OR10G7Q8NGN6 311 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 MRPL32Q9BYC8 188 aaKnown RBP15.92■□□□□ 0.14
CASC4-204ENST00000557945 FUT9Q9Y231 359 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 SMAD5-AS1Q9Y6J3 95 aa15.92■□□□□ 0.14
CASC4-204ENST00000557945 MBP02144 154 aa15.91■□□□□ 0.14
CASC4-204ENST00000557945 CD7P09564 240 aa15.91■□□□□ 0.14
CASC4-204ENST00000557945 C4BPBP20851 252 aa15.91■□□□□ 0.14
CASC4-204ENST00000557945 FAM122CQ6P4D5 195 aa15.91■□□□□ 0.14
CASC4-204ENST00000557945 BPIFA4PQ86YQ2 179 aa15.91■□□□□ 0.14
CASC4-204ENST00000557945 TRAV2A0A0B4J234 112 aa15.9■□□□□ 0.14
CASC4-204ENST00000557945 A0A1W2PPV4 95 aa15.9■□□□□ 0.14
CASC4-204ENST00000557945 SPP1P10451 314 aa15.9■□□□□ 0.14
CASC4-204ENST00000557945 TPT1P13693 172 aaKnown RBP15.9■□□□□ 0.14
CASC4-204ENST00000557945 K7EQG2 157 aa15.89■□□□□ 0.13
CASC4-204ENST00000557945 DEFA6Q01524 100 aa15.89■□□□□ 0.13
CASC4-204ENST00000557945 AKR1C8PQ5T2L2 129 aa15.89■□□□□ 0.13
CASC4-204ENST00000557945 BAP18Q8IXM2 172 aa15.89■□□□□ 0.13
CASC4-204ENST00000557945 DCANP1Q8TF63 244 aa15.89■□□□□ 0.13
CASC4-204ENST00000557945 UBQLN2Q9UHD9 624 aa15.89■□□□□ 0.13
CASC4-204ENST00000557945 SNRPCP09234 159 aaKnown RBP15.88■□□□□ 0.13
CASC4-204ENST00000557945 TMEM41BQ5BJD5 291 aa15.88■□□□□ 0.13
CASC4-204ENST00000557945 SLC25A2Q9BXI2 301 aa15.88■□□□□ 0.13
CASC4-204ENST00000557945 MRPS12O15235 138 aaKnown RBP15.87■□□□□ 0.13
CASC4-204ENST00000557945 EIF3GO75821 320 aaKnown RBP eCLIP15.87■□□□□ 0.13
CASC4-204ENST00000557945 MEOX2P50222 304 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 SLC51BQ86UW2 128 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 Q8N1Y9 231 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 FAM24BQ8N5W8 94 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 STOML3Q8TAV4 291 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 RPRMQ9NS64 109 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 SEC11BP0C7V7 166 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 ZNF688P0C7X2 276 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 CDC34P49427 236 aaPredicted RBP15.87■□□□□ 0.13
CASC4-204ENST00000557945 TAS2R45P59539 299 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 LRRC20Q8TCA0 184 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 FAM167A-AS1Q96KT0 104 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 C16orf92Q96LL3 132 aa15.87■□□□□ 0.13
CASC4-204ENST00000557945 OR11H12B2RN74 326 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 K7EIL1 84 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 OR7C2O60412 319 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 PYYP10082 97 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 CMC4P56277 68 aaPredicted RBP15.86■□□□□ 0.13
CASC4-204ENST00000557945 SNRPD3P62318 126 aaKnown RBP15.86■□□□□ 0.13
CASC4-204ENST00000557945 ODF3L2Q3SX64 289 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 KHDC3LQ587J8 217 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 SAMD13Q5VXD3 122 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 RPP25LQ8N5L8 163 aaKnown RBP15.86■□□□□ 0.13
CASC4-204ENST00000557945 TMED6Q8WW62 240 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 C17orf77Q96MU5 243 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 PAXXQ9BUH6 204 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 ACTR3CQ9C0K3 210 aaPredicted RBP15.86■□□□□ 0.13
CASC4-204ENST00000557945 WFDC10AQ9H1F0 79 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 TMEM14CQ9P0S9 112 aa15.86■□□□□ 0.13
CASC4-204ENST00000557945 A0A087X0K7 114 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 H3BTX0 84 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 BOLA2-SMG1P6H3BVE0 249 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 HMGB3O15347 200 aaKnown RBP15.85■□□□□ 0.13
CASC4-204ENST00000557945 IGLC2P0DOY2 106 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 ID1P41134 155 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 DEFB125Q8N687 156 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 OR51M1Q9H341 326 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 MAP6D1Q9H9H5 199 aa15.85■□□□□ 0.13
CASC4-204ENST00000557945 BOLA1Q9Y3E2 137 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms