RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KIR2DL5AQ8N109 375 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 KIR2DL5BQ8NHK3 375 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 TMEM37Q8WXS4 190 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 A0A087X0K7 114 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 BORCS7-ASMTA0A0B4J1R7 106 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 JTBO76095 146 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 FRMD6-AS1P0C7T7 363 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 PSMB3P49720 205 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 SERF2P84101 59 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 GUK1Q16774 197 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 Q5BKY6 102 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-234ENST00000557703 GBGT1Q8N5D6 347 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 PSMG3Q9BT73 122 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-234ENST00000557703 MRPL32Q9BYC8 188 aaKnown RBP10.19□□□□□ -0.78
SHMT2-234ENST00000557703 SLC25A22Q9H936 323 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 DOK5Q9P104 306 aa10.19□□□□□ -0.78
SHMT2-234ENST00000557703 PRKDCP78527 4128 aaKnown RBP10.18□□□□□ -0.78
SHMT2-234ENST00000557703 IGKV3-7A0A075B6H7 116 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 A0A0D9SG52 128 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 RNF222A6NCQ9 220 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 UBE2CO00762 179 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 MBP02144 154 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 ATF4P18848 351 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-234ENST00000557703 TCTE3Q8IZS6 198 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 DEFB125Q8N687 156 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 GNPNAT1Q96EK6 184 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-234ENST00000557703 MFFQ9GZY8 342 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 SLC25A32Q9H2D1 315 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 SRD5A3Q9H8P0 318 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
SHMT2-234ENST00000557703 TGP01266 2768 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 LOC102724200A0A096LPH7 203 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-234ENST00000557703 G3V3Q6 166 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 ZNF253O75346 499 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 TFPI2P48307 235 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 APOC4P55056 127 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 TMEM41BQ5BJD5 291 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 LCN15Q6UWW0 184 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 WFDC3Q8IUB2 231 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 OR2G3Q8NGZ4 309 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 UHRF2Q96PU4 802 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 RSG1Q9BU20 258 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 SCRT1Q9BWW7 348 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 HRH4Q9H3N8 390 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 TMEM14CQ9P0S9 112 aa10.17□□□□□ -0.78
SHMT2-234ENST00000557703 ARPC5O15511 151 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 TAS2R45P59539 299 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 RHOBP62745 196 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 PDE6HQ13956 83 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-234ENST00000557703 CLUHP3Q96NS8 147 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 SLC50A1Q9BRV3 221 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 SMIM3Q9BZL3 60 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 WFDC1Q9HC57 220 aa10.16□□□□□ -0.78
SHMT2-234ENST00000557703 SOCS3O14543 225 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
SHMT2-234ENST00000557703 M6PRP20645 277 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 DEFB131AP59861 70 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 NUTF2P61970 127 aaKnown RBP10.15□□□□□ -0.78
SHMT2-234ENST00000557703 EIF5AP63241 154 aaKnown RBP10.15□□□□□ -0.78
SHMT2-234ENST00000557703 FAM78BQ5VT40 261 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 KCNRGQ8N5I3 272 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 ST6GAL2Q96JF0 529 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 C16orf92Q96LL3 132 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 RPRMQ9NS64 109 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 SELENOKQ9Y6D0 94 aa10.15□□□□□ -0.78
SHMT2-234ENST00000557703 ZNF688P0C7X2 276 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 HIST1H1EP10412 219 aaKnown RBP10.14□□□□□ -0.79
SHMT2-234ENST00000557703 HAGHQ16775 308 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 FFAR4Q5NUL3 377 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 LEMD1Q68G75 181 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 MORN3Q6PF18 240 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-234ENST00000557703 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 Q6ZWC4 215 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 STHQ8IWL8 128 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 LRRC20Q8TCA0 184 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 UBQLN2Q9UHD9 624 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
SHMT2-234ENST00000557703 A0A1W2PPV4 95 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 RBMY1BA6NDE4 496 aaKnown RBP10.13□□□□□ -0.79
SHMT2-234ENST00000557703 RBMY1EA6NEQ0 496 aaKnown RBP10.13□□□□□ -0.79
SHMT2-234ENST00000557703 RBMY1DP0C7P1 496 aaKnown RBP10.13□□□□□ -0.79
SHMT2-234ENST00000557703 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 SPP1P10451 314 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 PSMG4Q5JS54 123 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 SBSPONQ8IVN8 264 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 HYLS1Q96M11 299 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
SHMT2-234ENST00000557703 C1QBP02746 253 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 C4BPBP20851 252 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 PSG9Q00887 426 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 KHDC3LQ587J8 217 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 EBLN2Q6P2I7 272 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms