RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 COL6A6A6NMZ7 2263 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 XRN1Q8IZH2 1706 aaKnown RBP1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 KIAA1551Q9HCM1 1747 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 PARP4Q9UKK3 1724 aaKnown RBP1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 KALRNO60229 2985 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 SBF1O95248 1867 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 ARFGEF3Q5TH69 2177 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 MBD5Q9P267 1494 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 CLTCL1P53675 1640 aa1.37□□□□□ -2.19
EFCAB11-213ENST00000557685 UBR5O95071 2799 aaPredicted RBP1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 TEX15Q9BXT5 2789 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 MYH7BA7E2Y1 1941 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 DENND4CQ5VZ89 1909 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 ZFYVE26Q68DK2 2539 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 QRICH2Q9H0J4 1663 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 BUB1B-PAK6H3BSN5 160 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 SMIM10L2AP0DMW4 78 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 SMIM10L2BP0DMW5 78 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 COX6A1P12074 109 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 CDC42P60953 191 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 HIST1H3AP68431 136 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 H3F3AP84243 136 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 CDK5R1Q15078 307 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 IAH1Q2TAA2 248 aaPredicted RBP1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 TMEM97Q5BJF2 176 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 OR6V1Q8N148 313 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 KRT222Q8N1A0 295 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 Q8N2B8 174 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 C10orf105Q8TEF2 133 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 DNAJC9Q8WXX5 260 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 TLNRD1Q9H1K6 362 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 BIRC6Q9NR09 4857 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 SLC39A9Q9NUM3 307 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 IL20Q9NYY1 176 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 FBXO5Q9UKT4 447 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 ERGIC3Q9Y282 383 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 CNOT1A5YKK6 2376 aaKnown RBP1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 CELSR3Q9NYQ7 3312 aa1.36□□□□□ -2.19
EFCAB11-213ENST00000557685 MAP1BP46821 2468 aaKnown RBP1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 ALPK2Q86TB3 2170 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 CPDO75976 1380 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 DOCK3Q8IZD9 2030 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 NALCNQ8IZF0 1738 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 SSC5DA1L4H1 1573 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 HECTD1Q9ULT8 2610 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 hADV38S2A0JD32 116 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 TMEM212A6NML5 194 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 OR5F1O95221 314 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 SHBGP04278 402 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 LYNX1P0DP58 116 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 S100A5P33763 92 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 PPP1R2P41236 205 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 DEFA1P59665 94 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 ZNF846Q147U1 533 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 CDK10Q15131 360 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 C10orf55Q5SWW7 151 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 PPP1R2P3Q6NXS1 205 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 HIST3H2BBQ8N257 126 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 GDPD1Q8N9F7 314 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 CT55Q8WUE5 264 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 CCDC90BQ9GZT6 254 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 RNASE7Q9H1E1 156 aaKnown RBP1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 IDI2-AS1Q9NZ38 188 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 GLTPQ9NZD2 209 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 PTPRZ1P23471 2315 aaPredicted RBP1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 SBF2Q86WG5 1849 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 ZZEF1O43149 2961 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 ZFHX3Q15911 3703 aa1.35□□□□□ -2.19
EFCAB11-213ENST00000557685 RTL1A6NKG5 1358 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 EXPH5Q8NEV8 1989 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 IGKV3-7A0A075B6H7 116 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 A0A0D9SG52 128 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 OR2J2O76002 312 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 CTSDP07339 412 aaPredicted RBP1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 IL9P15248 144 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 MRPS25P82663 173 aaKnown RBP1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 TAF1AQ15573 450 aaPredicted RBP1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 C12orf74Q32Q52 190 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 KHDC3LQ587J8 217 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 DPPA3Q6W0C5 159 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 LINC00471Q8N535 108 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 SIGLECL1Q8N7X8 197 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 OR10X1Q8NGY0 326 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 SERPINI1Q99574 410 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 MIXL1Q9H2W2 232 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 OR5AC2Q9NZP5 309 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 NHSQ6T4R5 1651 aa1.34□□□□□ -2.19
EFCAB11-213ENST00000557685 RYR3Q15413 4870 aa1.34□□□□□ -2.2
EFCAB11-213ENST00000557685 KNDC1Q76NI1 1749 aa1.34□□□□□ -2.2
EFCAB11-213ENST00000557685 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.2
EFCAB11-213ENST00000557685 EIF2AK4Q9P2K8 1649 aaKnown RBP1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 NAIPQ13075 1403 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 TENM4Q6N022 2769 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 LMO7Q8WWI1 1683 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 C2CD3Q4AC94 2353 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 NAV3Q8IVL0 2385 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 MRC1P22897 1456 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 CCDC141Q6ZP82 1450 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 HYDINQ4G0P3 5121 aa1.33□□□□□ -2.2
EFCAB11-213ENST00000557685 IGKV1D-42A0A075B6H8 117 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms