RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ZNF138P52744 262 aa14.02□□□□□ -0.16
XRCC3-218ENST00000557439 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.16
XRCC3-218ENST00000557439 PRSS22Q9GZN4 317 aa14.02□□□□□ -0.16
XRCC3-218ENST00000557439 FAM181BA6NEQ2 426 aa14.02□□□□□ -0.17
XRCC3-218ENST00000557439 K7EIM0 57 aa14.02□□□□□ -0.17
XRCC3-218ENST00000557439 Q86TA4 180 aa14.02□□□□□ -0.17
XRCC3-218ENST00000557439 TNFRSF14Q92956 283 aa14.02□□□□□ -0.17
XRCC3-218ENST00000557439 VKORC1Q9BQB6 163 aa14.02□□□□□ -0.17
XRCC3-218ENST00000557439 ZNF785A8K8V0 405 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 IGLV2-11P01706 119 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 HBBP68871 147 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 DAZAP1Q96EP5 407 aaKnown RBP14.01□□□□□ -0.17
XRCC3-218ENST00000557439 FMC1Q96HJ9 113 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 LY6LH3BQJ8 138 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 RPLP1P05386 114 aaKnown RBP14.01□□□□□ -0.17
XRCC3-218ENST00000557439 CA7P43166 264 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 RBPJQ06330 500 aa14.01□□□□□ -0.17
XRCC3-218ENST00000557439 MRPL27Q9P0M9 148 aaKnown RBP14.01□□□□□ -0.17
XRCC3-218ENST00000557439 K7ENP7 123 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 COL8A1P27658 744 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 NBL1P41271 181 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 PLP1P60201 277 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 HES1Q14469 280 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 RASL11AQ6T310 242 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 M0R3E3 92 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 OR2J3O76001 311 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 IGHV3-23P01764 117 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 IGLC2P0DOY2 106 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 IGLC3P0DOY3 106 aa14□□□□□ -0.17
XRCC3-218ENST00000557439 A8MWL6 223 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 Q6ZN92 141 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 OR8B2Q96RD0 313 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 TXN2Q99757 166 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 CHRDL1Q9BU40 450 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 MCRIP2Q9BUT9 160 aaKnown RBP13.99□□□□□ -0.17
XRCC3-218ENST00000557439 LPAR2Q9HBW0 351 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 TIMM8BQ9Y5J9 83 aaPredicted RBP13.99□□□□□ -0.17
XRCC3-218ENST00000557439 IL4P05112 153 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 KLF5Q13887 457 aaPredicted RBP13.99□□□□□ -0.17
XRCC3-218ENST00000557439 OR8B3Q8NGG8 313 aa13.99□□□□□ -0.17
XRCC3-218ENST00000557439 RBM14Q96PK6 669 aaKnown RBP13.99□□□□□ -0.17
XRCC3-218ENST00000557439 CCL21O00585 134 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 ZNF124Q15973 351 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 ZC2HC1AQ96GY0 325 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 TMEM208Q9BTX3 173 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 OTORQ9NRC9 128 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 C2orf70A6NJV1 201 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 NPSP0C0P6 89 aa13.98□□□□□ -0.17
XRCC3-218ENST00000557439 IGHV3OR16-8A0A075B7F1 116 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 LIPFP07098 398 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 FCGR2BP31994 310 aaPredicted RBP13.97□□□□□ -0.17
XRCC3-218ENST00000557439 CSN3P07498 182 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 HTR1DP28221 377 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 Q6ZVH6 145 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 ATP5L2Q7Z4Y8 100 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 TPPP3Q9BW30 176 aa13.97□□□□□ -0.17
XRCC3-218ENST00000557439 FAM120AOSQ5T036 256 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 RBPMS2Q6ZRY4 209 aaKnown RBP13.96□□□□□ -0.17
XRCC3-218ENST00000557439 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 STPG4Q8N801 248 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 ZNF491Q8N8L2 437 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 NBR2O15453 112 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 CFHR4Q92496 578 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 ZNF492Q9P255 531 aa13.96□□□□□ -0.17
XRCC3-218ENST00000557439 TRBV19A0A075B6N1 114 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 M0QZK8 103 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 NDPQ00604 133 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 IGHV3-35A0A0C4DH35 117 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 H0Y8G0 127 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 OVOL3O00110 214 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 CHEK1O14757 476 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 ARMS2P0C7Q2 107 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
XRCC3-218ENST00000557439 RNF125Q96EQ8 232 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 SHANK2-AS3Q9BTD1 123 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 DPM3Q9P2X0 92 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 UQCR10Q9UDW1 63 aa13.95□□□□□ -0.18
XRCC3-218ENST00000557439 IGHV1-24A0A0C4DH33 117 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 HLA-DRB1P01911 266 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 IGLL1P15814 213 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 SIGLEC15Q6ZMC9 328 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 C8orf49Q96NF6 230 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 CELSR1Q9NYQ6 3014 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 TMSB15BA0A087X1C1 80 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 MUC21A0A0G2JKD1 596 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 MUC21A0A140T8X8 626 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 CRIP1P50238 77 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 MUC21Q5SSG8 566 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 BPIFA4PQ86YQ2 179 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 SMIM12Q96EX1 92 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 TMEM14CQ9P0S9 112 aa13.94□□□□□ -0.18
XRCC3-218ENST00000557439 H3BRN7 92 aa13.93□□□□□ -0.18
XRCC3-218ENST00000557439 APOHP02749 345 aaPredicted RBP13.93□□□□□ -0.18
XRCC3-218ENST00000557439 IGFL4Q6B9Z1 124 aa13.93□□□□□ -0.18
XRCC3-218ENST00000557439 LY6G5BQ8NDX9 201 aa13.93□□□□□ -0.18
XRCC3-218ENST00000557439 NCBP2LA6PVI3 153 aaKnown RBP13.93□□□□□ -0.18
XRCC3-218ENST00000557439 HINT1P49773 126 aaPredicted RBP13.93□□□□□ -0.18
XRCC3-218ENST00000557439 PAX2Q02962 417 aa13.93□□□□□ -0.18
XRCC3-218ENST00000557439 OR4F17Q8NGA8 305 aa13.93□□□□□ -0.18
XRCC3-218ENST00000557439 LOC102724200A0A096LPH7 203 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms